Picoplankton 18S rRNA gene sequences (V4 region, DNA and RNA) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition

doi:10.15468/7hsetf

Picoplankton 18S rRNA gene sequences (V4 region, DNA and RNA) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition

Citation

MGnify (2021). Picoplankton 18S rRNA gene sequences (V4 region, DNA and RNA) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition. Sampling event dataset https://doi.org/10.15468/7hsetf accessed via GBIF.org on 2024-12-15.

Description

The study here includes 182 samples (91 DNA and 91 RNA) of the 18S (V4 region) from the Malaspina-2010 expedition. The samples were sequenced using Illumina MiSeq 2x250bp.

Sampling Description

Sampling

The study here includes 182 samples (91 DNA and 91 RNA) of the 18S (V4 region) from the Malaspina-2010 expedition. The samples were sequenced using Illumina MiSeq 2x250bp.

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/5.0

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Giner CR, Pernice MC, Balagué V, Duarte CM, Gasol JM, Logares R, Massana R. 2020. Marked changes in diversity and relative activity of picoeukaryotes with depth in the world ocean. ISME J vol. 14 - DOI:10.1038/s41396-019-0506-9

Contacts

originator
INSTITUT DE CIENCIES DEL MAR

metadata author
INSTITUT DE CIENCIES DEL MAR

administrative point of contact
INSTITUT DE CIENCIES DEL MAR