Otoliths Reference Collection. CBMR-AFORO (ICM-CSIC)

Òscar Chic; Amalia Manjabacas; Elena Guerrero

doi:10.15468/wdwxid

Otoliths Reference Collection. CBMR-AFORO (ICM-CSIC)

Citation

Chic Ò, Manjabacas A, Guerrero E, Lombarte A (2023). Otoliths Reference Collection. CBMR-AFORO (ICM-CSIC). Institut de Ciències del Mar (CSIC). Occurrence dataset https://doi.org/10.15468/wdwxid accessed via GBIF.org on 2024-12-12.

Description

This collection is a catalogue of the otolith part of the CBMR (ICM-CSIC) and associated to the data base AFORO. The database is regularly updated and at present (2023) it contains a total of 7905 high resolution images corresponding to 2716 species from 274 families at the CBMR of the Institut de Ciències del Mar (ICM-CSIC) from worldwide, especially in Mediterranean, Canary Islands, Antarctic and Namibian waters. Also, AFORO shows images from diverse atlases of otoliths (Rivaton & Bourret 1999; Leopold, van Damme, Philippart & Winter 2001; Campana 2004; Tuset, Lombarte & Assis 2008; Lin & Chang 201; Sadighzadeh, Tuset, Dadpour, Otero-Ferrer, Lombarte 2012; Volpedo, Thompson & Avigliano 2017). AFORO website (http://aforo.cmima.csic.es/) offers an online open catalogue of otolith images and its associated shape analysis through pattern recognition techniques applying wavelet analysis (WT), elliptic Fourier analysis (EFA) and classical morphometries, including relationship with fish length. The website also includes an Automatic Taxon Identification that allows to search and identify directly using query images of otoliths. The data base also is associated with Fishbase and Osteobase datbases. More information about the catalogue is here: https://scientiamarina.revistas.csic.es/index.php/scientiamarina/article/view/192

Sampling Description

Method steps

Taxonomic Coverages

Acipenseriformes
rank: order
Albuliformes
rank: order
Anguilliformes
rank: order
Argentiniformes
rank: order
Atheriniformes
rank: order
Aulopiformes
rank: order
Batrachoidiformes
rank: order
Beloniformes
rank: order
Beryciformes
rank: order
Characiformes
rank: order
Clupeiformes
rank: order
Cypriniformes
rank: order
Cyprinodontiformes
rank: order
Elopiformes
rank: order
Gadiformes
rank: order
Gasterosteiformes
rank: order
Gasterostiformes
rank: order
Gonorynchiformes
rank: order
Lampridiformes
rank: order
Lophiiformes
rank: order
Mugiliformes
rank: order
Myctophiformes
rank: order
Ophidiiformes
rank: order
Osmeriformes
rank: order
Osteoglossiformes
rank: order
Perciformes
rank: order
Pleuronectiformes
rank: order
Polymixiiformes
rank: order
Salmoniformes
rank: order
Scorpaeniformes
rank: order
Siluriformes
rank: order
Stephanoberyciformes
rank: order
Stomiiformes
rank: order
Tetraodontiformes
rank: order
Zeiformes
rank: order
Animalia
rank: kingdom
Chordata
rank: phylum

Geographic Coverages

Species and families from the Mediterranean Sea, Antarctic Ocean (Weddell Sea, Ross Sea, Antarctic Peninsula), Atlantic Ocean (Argentina, Uruguay, South-western Islands, Gulf of Mexico, USA, Canada, Baltic Sea, North Sea, Ireland Sea, Cantabric Sea, Portugal, Madeira, Canary Islands, Morocco, Cabo Verde, Senegal, Gabon, Namibia), Indic Ocean (Madagascar, Tanzania, Red Sea, Iran) and Pacific (Australia, New Zealand, New Caledonia, Muroroa, Peru, Ecuador, Canada, Alaska).

Bibliographic Citations

Contacts

Òscar Chic
originator
position: Data Science Lab Manager
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37-49
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: ochic@icm.csic.es
homepage: http://www.icm.csic.es/

Amalia Manjabacas
originator
position: Technician
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37-49
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: manjabacas@icm.csic.es
homepage: http://www.icm.csic.es/

Elena Guerrero
originator
position: Curator
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37.
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: cbr@icm.csic.es
homepage: https://cbr.icm.csic.es/en

Antoni Lombarte
metadata author
position: Researcher
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37-49
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: toni@icm.csic.es
homepage: http://www.icm.csic.es/

Amalia Manjabacas
metadata author
position: Technician
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37-49
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: manjabacas@icm.csic.es
homepage: http://www.icm.csic.es/

Elena Guerrero
metadata author
position: Curator
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37.
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: cbr@icm.csic.es
homepage: https://cbr.icm.csic.es/en

Amalia Manjabacas
administrative point of contact
position: Technician
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37-49
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: manjabacas@icm.csic.es
homepage: http://www.icm.csic.es/

Elena Guerrero
administrative point of contact
position: Curator
Institut de Ciències del Mar (ICM-CSIC)
Passeig Marítim de la Barceloneta, 37-49.
Barcelona
E-08003
Barcelona
ES
Telephone: +34 93 230 95 00
email: cbr@icm.csic.es
homepage: https://cbr.icm.csic.es/en
userId: https://orcid.org/0000-0003-1657-6648