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GBIF.org (03 November 2021) GBIF Occurrence Download https://doi.org/10.15468/dl.knkxq3
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Download as TSV
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820iNaturalist Research-grade Observations
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660Fungal Records Database of Britain and Ireland
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602Eukaryotic diversity in Central Park
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516Observation.org, Nature data from around the World
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423Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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284CABI Bioscience Fungus Collection
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264Banc de dades de biodiversitat de Catalunya-FungaCat
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257Biome of Australia Soil Environments
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220Marine metagenomes Metagenome
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195INSDC Host Organism Sequences
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185Plant niche rather than soil or species shapes the microbiota
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128Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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116naturgucker
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86EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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84Jena Microbial Resource Collection (JMRC) at Leibniz Institute for Natural Product Research and Infection Biology e.V. Hans-Knöll-Institute (HKI) and Friedrich Schiller University Jena
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77The New York Botanical Garden Herbarium (NY)
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72University of Michigan Herbarium
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68NBIS Records to December 2016
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61International Barcode of Life project (iBOL)
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58Artportalen (Swedish Species Observation System)
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58Nahant Collection
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52INSDC Sequences
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50Fungal Biodiversity Centre (CBS) - Fungi strains
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48Microbial populations of Lascauxs Apse in relation to collembola and black stains on cave walls.
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48ATCC Fungi Collection Catalog
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42CABI Bioscience Genetic Resource Collection
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40Marine Water Column Samples Targeted loci environmental
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40All taxa records for Leicestershire and Rutland
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38Norwegian Species Observation Service
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37Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study)
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37New Zealand Fungal and Plant Disease Collection (PDD)
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34CBS Filamentous Fungi Database
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23Extracellular DNA marine sediment Targeted Locus (Loci)
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23Danish Mycological Society, fungal records database
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23Water and Sediment samples Targeted loci environmental
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22INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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21sediment metagenome Raw sequence reads
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21Canberra Nature Map
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20University of Graz, Institute of Plant Sciences - Herbarium GZU
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19Fungi (S)
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16marine sediment metagenome Metagenome
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16Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Department of Plant Protection
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16Soil marker gene sequences across the Nutrient Network
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15CEDaR Online Recording
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14Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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13Harvard University Herbaria: All Records
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13Leicestershire and Rutland Environmental Records Centre records 2010-2014
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13Rutgers University, Chrysler Herbarium - Mycology Collection
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11University of Tennessee Fungal Herbarium
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11Naturalis Biodiversity Center (NL) - Botany
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11Merseyside BioBank Active Naturalists (unverified)
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11North Sea plastic incubation and reference communities, raw sequence reads
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11Swiss National Fungi Databank
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10SEWBReC Fungi (South East Wales)
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10Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation
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10sediment metagenome Metagenome
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9Sea ice and seawater Raw sequence reads
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9anchialine metagenome Raw sequence reads
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9Fungal Specimens of National Museum of Nature and Science (TNS)
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9Mycology Collection Catalogue, Royal North Shore Hospital
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8Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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8URM - Herbário Pe. Camille Torrand
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8Temporal variation in pesticide biodegradation
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8Bell Museum fungi
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8Zooplankton communities in the coastal water of northeastern Hokkaido
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7Marine metagenomes from the bioGEOTRACES project
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7Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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7Estudio de la microflora de los suelos de la zona de preservación ecológica 'La Uva' (Sinaloa) con vegetación de selva baja caducifolia empleando taxonomía molecular
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7Protists community in the southern East China Sea
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7Suffolk Biodiversity Information Service (SBIS) Dataset
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6Macroalgal Morphology affects composition and settlement of microbial communities
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6Fungi specimen database of Kanagawa Prefectural Museum of Natural History
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6Rotherham Biological Records Centre - Non-sensitive Records from all taxonomic groups
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6Meise Botanic Garden Herbarium (BR)
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6Sea spray aerosols at Three California Beaches
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5White sea picoplankton Metagenome
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5Fongs d'Andorra
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5California Current Cruise CCE-P1408 Process Cruise #6
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5Protist Diversity in the East China Sea
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5Microbial communities associated with Eurasian watermilfoil, water and sediment
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5Microbial biogeography of French caves
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5Diet analysis of Pacific Bluefin Tuna larvae
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5Soil metagenome from healthy and unhealthy agricultural soil
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5Sediment of acid mine drainage Targeted loci environmental
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5Lund Botanical Museum (LD)
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5Research on Airborne Ice Nucleating Species
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5VKM Microbial Cultures from Former USSR
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5LERN Records
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5PlutoF platform reference-based occurrences
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5Earth Guardians Weekly Feed
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5Sediment Metagenome Raw sequence reads
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4HBRG Fungus, Lichen & Lower Plants Dataset
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4Diet analysis of Japanese sardine and Pacific round herring larvae
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4Duke University, Herbarium Fungal Collection
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4sediment metagenome Metagenome
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4DSMZ Fungi
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4CSIC-Real Jardín Botánico-Colección de Hongos (MA-Fungi)
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4The Indigo Project: a global citizen science Ocean survey
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4台灣真菌地理分布系統資料庫之建制與應用(1/4)
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3Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
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3Leicestershire and Rutland Environmental Records Centre records 2000-2009
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3Temporal sampling of marine metagenomes from Station ALOHA and BATS
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3SOLA Raw sequence reads
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3Herbarium of Umeå University (UME)
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3Metagenomic community analysis of marine zooplankton using two plankton nets
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3CARBOM cruise 2013 flow cytometry sorted phytoplankton
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3Microbial communities in estuarine sediments
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3Environmental eukaryotes Metagenome
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3Herbarium GB, University of Gothenburg
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2Fiocruz/CCFF - Coleção de Culturas de Fungos Filamentosos
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2Cercle des mycologues de Montréal Fungarium (CMMF)
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2Mycology herbarium, UiT Tromsø Museum
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2National Trust Species Records
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2Assessing the microbial diversity in Cape Comorin ocean water
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2Fungus Collections at Staatliches Museum für Naturkunde Karlsruhe (Herbarium KR)
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2DAR AVH data
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2Gloucestershire Historic Wildlife Sightings prior to 1st Jan 2000
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2ARMS Jeddah sample Raw sequence reads
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2Field Museum of Natural History (Botany) Fungi Collection
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2DSMZ Collection of Filamentous Fungi and Yeasts
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2Herbarium Senckenbergianum (FR) - Fungi
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2Botanical Museum, Copenhagen, Mycology Herbarium
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2Photographs of higher plants, mosses, fungi, lichens, and algae
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2Nutrient addition mesocosm experiment Targeted Locus (Loci)
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2Dr Mary Gillham Archive Project
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2Eukaryote diversity assessment of sediments of the Western English Channel
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2Fungal diversity in Sanya mangrove sediments, China
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2Marine sediment metagenome raw sequence reads
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2Bernice P. Bishop Museum
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2Royal Botanic Garden Edinburgh Herbarium (E)
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2Leicestershire and Rutland Environmental Records Centre records 2015-2019
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2Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
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2The Fungal, Lichen and Plant Collections at the Herbarium Marburgense
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2The Masayo Kato Fungi Collection, The University Museum, The University of Tokyo.
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2Depth dependent (0-5,000 m) and seasonal variability in archaeal community structure in the subarctic and subtropical western North Pacific.
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2The Fungarium of Yugra State University
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2soil bacteria and fungi Targeted loci environmental
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2Records of the Western Australian Mycology Culture Collection
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1Merseyside BioBank (unverified)
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1Mycological collection of the National Museum
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1Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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1Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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1Shropshire Ecological Data Network database
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1Geotraces Raw sequence reads
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1Fungal literature records database of the Northern West Siberia (Russia)
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1Fungi of parks, forests and reserves of New Jersey, 2018
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1Queensland Marine Sediment
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1Comparison of copper contaminated soils, with similar uncontaminated controls.
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1BIOWIDE eDNA Fungi dataset
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1DSW-2
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1Marine sediment metagenome ICM_DSE
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1Brown University Herbarium
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1Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils
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1South China Sea interfaces 16S amplicon sequencing
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1INSDC Environment Sample Sequences
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1Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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1Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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1Red Sea microbial plankton Raw sequence reads
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1BRERC species records from all years at full resolution excluding Notable Species within the last 10 years
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1Ireland's BioBlitz
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1Herbarium (AMNH)
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1CSIC-Real Jardín Botánico-Colección de Hongos Histórica (MA-Funhist)
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1Japan Collection of Microorganisms, RIKEN BioResource Center
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1ALA species sightings and OzAtlas
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1IFO Filamentous Fungi
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1Japan Collection of Microorganisms(Fungi)
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1Patrick Roper’s Notebooks
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1USS-2
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1Fungal occurrences from the Basque Country and neighbouring areas: ARAN-Fungi
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1University of Tartu Natural History Museum and Botanical Garden Mycological Collections
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1Microbial eukaryote 454 Roche sequencing in estuarine ecosystems
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1marine sediment Raw sequence reads
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1Marine metagenome ICM_JRV
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1SER Species-based Surveys
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1Microbial Processes and Biodiversity: OCEAN
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1Polymetallic nodule field Targeted loci environmental
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1Metabarcoding surveys of the Arctic marine environment
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1University of British Columbia Herbarium (UBC) - Fungi Collection
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1Southern Ocean microorganisms Targeted Locus (Loci)
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1There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work
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1Intermountain Herbarium (fungi, not lichens), Utah State University
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1Red Sea Zooplankton Raw sequence reads
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1Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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1Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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1Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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1Fungi Collection in BCRC
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1Microeukaryotes in metagenomic survey of ancient Siberian permafrost
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1Nitrate-storing microorganisms in sediments of the Bornholm Basin
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1Estonian Naturalists’ Society
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1PACA-Fungi - Herbarium Anchieta - Fungi Rickiani