Biological survey of lakes and reservoirs from Sardinia and Piedmont (Italy), a georeferenced dataset from the project LIFE INHABIT
Citation
Austoni M, Boggero A, Kamburska L, Lugliè A, Marchetto A, Oggioni A, M. Padedda B, Volta P, Zaupa S (2023). Biological survey of lakes and reservoirs from Sardinia and Piedmont (Italy), a georeferenced dataset from the project LIFE INHABIT. Version 1.9. Consiglio Nazionale delle Ricerche - Istituto di Ricerca sulle Acque. Sampling event dataset https://doi.org/10.15468/gcqhsj accessed via GBIF.org on 2024-08-25.Description
We report a georeferenced dataset of a biological survey carried out in lakes and reservoirs in Piedmont and Sardinia regions (Italy), including phytoplankton, macrophytes, macroinvertebrates and fish fauna. This survey was carried out to test the standardised protocols later adopted for biological monitoring in Italy for the assessment of the ecological status of lakes and the ecological potential of reservoirs for satisfying the requirements of the European Water Framework Directive (WFD) Directive 2000/60/EC. Occurrence data have been uploaded to the Global Biodiversity Information Facility (GBIF).Sampling Description
Study Extent
The 3549 georeferenced occurrence records at the species level or higher rank have been uploaded to the GBIF platform, for a total of 455 taxa collected during 904 sampling events. The occurrences were recorded during the years from 2006 to 2012.Sampling
Sampling was performed from 2006-06-22 to 2012-11-07. More specifically for each Quality Element:• Phytoplankton: sampling from 23 March 2010 to 28 December 2011
• Macrophytes: sampling from 2 August 2010 to 2 August 2011
• Macrobenthos: sampling from 22 June 2006 to 27 September 2011
• Fish fauna: sampling from 14 November 2007 to 7 November 2012
Phytoplankton was sampled from six to three times at maximum depth point. Macrophytes were sampled along transects from the shore to the maximum depth point were macrophytes were still present. Macroinvertebrate were generally sampled during both stratification and circulation mixing of the lakes and reservoirs periods using a grab on soft sediments along transect connecting the shores to the maximum depths. Sampling was carried out in the form of a stratified sampling, working on transects with sampling sites arranged to give equal coverage of the different habitats and different depths. Each sampling site is located along transects connecting the shore-line to the maximum depth, covering three main characteristic lake areas differing in depth (littoral, sublittoral and profundal). Fish fauna was sampled using both standard nets (Pokorny-Site, Czech Republic) and electrofishing.
Quality Control
Quality control for geographic data: coordinates were collected by GPS during sampling and verified on topographic maps.Quality control for taxonomic data: All records are validated using the taxonomic backbone of GBIF and Algaebase: Listing of World’s Algae.
Method steps
- The dataset was built based on scientific papers and several technical reports published in the frame of project LIFE INHABIT (Idromorfologia locale, habitat e Piani di Gestione: nuove misure per migliorare la qualità ecologica in fiumi e laghi sud europei LIFE08 ENV/IT/000413). Sampling procedures followed standardized sampling protocols. Data were gathered in a csv following DwC term names (http://rs.tdwg.org/dwc/terms/).
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To describe Sampling Event files, dataset fields’ names were chosen according to Darwin Core (Wieczorek et al., 2012) and include several data columns divided into two CSV sheets (Occurrence and Event) for each Bilogical Quality Element that are Fish fauna, Macrobenthos, Macrophytes and Phytoplankton:
•Occurrence file, data set includes the following 31 column headers (using DwC term name:
http://rs.tdwg.org/dwc/terms/): “eventid”, “eventDate”, “occurrenceID”, “basisOfRecord”, “originalNameUsage”, “scientificName“ “decimalLatitude”, “decimalLongitude”, “verbatimCoordinateSystem”, “geodeticDatum”, “countryCode”, “organismQuantity”, “organismQuantityType”, “occurrenceStatus”, “kingdom”, “Phylum”, “Class”, “Order”, “Family”, “Genus”, “specificEpithet”, “infraspecificEpithet”, “taxonRank”, “taxonomicStatus”, “taxonID”, “references”, “identifiedBy”, “verbatimDepth”, “WaterBody”, “locality”, “country”.
•Event file, data set includes the following 14 column headers (using DwC term name:
http://rs.tdwg.org/dwc/terms/) “eventide”, “eventDate”, “samplingProtocol”, “sampleSizeValue”, “sampleSizeUnit”, “decimalLatitude”, “decimalLongitude”, “geodeticDatum”, “countryCode”, “country”, “verbatimSRS”, “verbatimLatitude”, “verbatim.Longitude”, “verbatimCoordinateSystem”.
All records are validated using the taxonomic backbone of GBIF and Algaebase: Listing of World’s Algae
Taxonomic Coverages
Geographic Coverages
Sites are distributed in two Italian regions: Sardinia (five reservoirs and the only one natural lake of the island) and Piedmont (five lakes and two reservoirs). The following sites are part of the Long-Term Ecological Research (eLTER) Network: Candia (https://deims.org/c7fe4203-24b1-4d11-a573-99b99204fede), Bidighinzu (https://deims.org/67757ba9-c40c-4e2c-bdad-bc26905a738e) and Sos Canales (https://deims.org/e8374da3-1644-460b-bd4c-bf669514dd22). Data are georeferenced according to WGS 84 datum.
Habitat type: Pelagic and littoral areas of lakes and reservoirs.
Biogeographic region: Within the Palearctic realm, according to the definitions of the European Environmental Agency (2017), the dataset covers two European biogeographical regions: Alpine and Mediterranean.
Country: Italy.
Habitat type: Pelagic and littoral areas of lakes and reservoirs.
Biogeographic region: Within the Palearctic realm, according to the definitions of the European Environmental Agency (2017), the dataset covers two European biogeographical regions: Alpine and Mediterranean.
Country: Italy.
Bibliographic Citations
- Bianco PG, Delmastro G B, 2011. Recenti novità tassonomiche riguardanti i pesci d'acqua dolce autoctoni in Italia e descrizione di una nuova specie di luccio. Researches on Wildlife Conservation. IGF Publishing, USA. 2(suppl.): 1-13.<br> CEN 15204:2006. Water quality - Guidance standard on the enumeration of phytoplankton using inverted microscopy (Utermöhl technique).<br> European Environmental Agency, 2017. Biogeographical regions in Europe. European Topic Centre on Biological Diversity (ETC/BD). Permalink: 3431629fe50049a7b995d125aad9c71d.<br> Guiry MD, Guiry GM, 2022. AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. https://www.algaebase.org.<br> Hillebrand, H., Dürselen, C. D., Kirschtel, D., Pollingher, U. and Zohary, T. (1999) Biovolume calculation for pelagic and benthic microalgae. J. Phycol., 35, 403–424.<br> Sun, J. and Liu, D. Y. (2003) Geometric models for calculating cell biovolume and surface area for phytoplankton. J. Plankton Res., 25, 1331–1346.<br> Wieczorek J, Bloom D, Guralnick R, Blum S, Döring M, Giovanni R, Robertson T, Vieglais D, 2012. Darwin Core: an evolving community-developed biodiversity data standard. PloS One 7(1): e29715. -
Contacts
Martina Austonioriginator
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
email: martina.austoni@cnr.it
userId: https://orcid.org/0000-0002-8214-1442
Angela Boggero
originator
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
email: angela.boggero@cnr.it
userId: https://orcid.org/0000-0002-7534-3126
Lyudmila Kamburska
originator
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA); National Biodiversity Future Center (NBFC)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
email: lyudmila.kamburska@irsa.cnr.it
userId: https://orcid.org/0000-0001-5071-6953
Antonella Lugliè
originator
Università degli Studi di Sassari, Dipartimento di Architettura, Design e Urbanistica; National Biodiversity Future Center (NBFC)
via Piandanna 4
Sassari
07100
Sassari
IT
email: luglie@uniss.it
userId: https://orcid.org/0000-0001-6382-4208
Aldo Marchetto
originator
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbano-Cusio-Ossola
IT
email: aldo.marchetto@cnr.it
userId: https://orcid.org/0000-0002-1033-4114
Alessandro Oggioni
originator
position: Researcher
Consiglio Nazionale delle Ricerche, Istituto per il Rilevamento Elettromagnetico dell’Ambiente (CNR-IREA)
via A. Corti 12
Milano
20133
IT
email: alessandro.oggioni@cnr.it
userId: https://orcid.org/0000-0002-7997-219X
Bachisio M. Padedda
originator
position: Researcher
Università degli Studi di Sassari, Dipartimento di Architettura, Design e Urbanistica; National Biodiversity Future Center (NBFC)
via Piandanna 4
Sassari
07100
Sassari
IT
email: bmpadedda@uniss.it
userId: https://orcid.org/0000-0002-0988-5613
Pietro Volta
originator
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
email: pietro.volta@cnr.it
userId: https://orcid.org/0000-0003-3177-0473
Silvia Zaupa
originator
position: PostDoc
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
email: silvia.zaupa@gmail.com
userId: https://orcid.org/0000-0001-7379-6087
Lyudmila Kamburska
metadata author
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA); National Biodiversity Future Center (NBFC)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbano-Cusio-Ossola
IT
email: lyudmila.kamburska@irsa.cnr.it
Martina Austoni
metadata author
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbano-Cusio-Ossola
IT
email: martina.austoni@cnr.it
Aldo Marchetto
metadata author
position: Researcher
CNR-IRSA
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbano-Cusio-Ossola
IT
email: aldo.marchetto@cnr.it
userId: https://orcid.org/0000-0002-1033-4114
Lyudmila Kamburska
point of contact
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA); National Biodiversity Future Center (NBFC)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbano-Cusio-Ossola
IT
email: lyudmila.kamburska@irsa.cnr.it
userId: https://orcid.org/0000-0001-5071-6953
Aldo Marchetto
owner
position: Director
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA); National Biodiversity Future Center (NBFC)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
Telephone: 3468473975
email: aldo.marchetto@cnr.it
homepage: https://www.researchgate.net/profile/Aldo-Marchetto
userId: https://orcid.org/0000-0002-1033-4114
Martina Austoni
owner
position: Researcher
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
email: martina.austoni@cnr.it
homepage: https://www.researchgate.net/profile/Martina_Austoni
Aldo Marchetto
administrative point of contact
position: Director
Consiglio Nazionale delle Ricerche (CNR), Istituto di Ricerca sulle Acque (IRSA); National Biodiversity Future Center (NBFC)
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbania
IT
email: aldo.marchetto@cnr.it
homepage: https://www.researchgate.net/profile/Aldo-Marchetto
userId: https://orcid.org/0000-0002-1033-4114
Martina Austoni
administrative point of contact
position: Reseracher
CNR-IRSA
Largo Vittorio Tonolli 50 CNR-IRSA
Verbania
28922
Verbano-Cusio-Ossola
IT
email: martina.austoni@irsa.cnr.it