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Download as TSV
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5MMarine metagenomes Metagenome
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1MNahant Collection
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987kAmplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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351kEMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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294kCoral
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231kZostera Marina Ammonification environmental
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191kDevelopment and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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165kEffects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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164kMicrobial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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125kDEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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120kBacterial 16s Amplicon Sequencing of the Atlantic Ocean
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117kBiological Impacts of Ocean Acidification
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108kSCHEMA_Sediment
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102kSediment surface microbial community changes due to phytoplankton addition
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91kBacteria exposure experiment North Sea
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84kMacroalgal Morphology affects composition and settlement of microbial communities
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79k16S Amplicon Data from an Antarctic Cold Seep
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78kNutrient addition mesocosm experiment Targeted Locus (Loci)
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77kLittle Sippewissett Marsh Targeted Locus (Loci)
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76kPolymetallic nodule field Targeted loci environmental
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72kmarine sediment metagenome Metagenome
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68kMicrobial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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65kmarine sediment metagenome Targeted loci environmental
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58kRed Sea microbial plankton Raw sequence reads
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52kShort-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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52kExtracellular DNA marine sediment Targeted Locus (Loci)
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51kMarine methane seep Targeted Locus (Loci)
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50kIt was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.
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49kMariana and Kermadec Trench sediment 16S rRNA gene sequencing
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49kMarine Water Column Samples Targeted loci environmental
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48kSoil microbial response to organic disturbances
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47kReciprocal transplantation experiment of salt marsh sediments Targeted loci
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46kBacterial Diversity in the East China Sea
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45kBacterial Biogeography of Coastal Water in the Northern East China Sea
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45kBiological rejuvenation of iron oxides in bioturbated marine sediments
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44kHeterogeneity of methane seep microbiomes in the NE Pacific
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44kImpact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea
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43kMicrobial diversity in the Tongyeong-Geoje coastal area of Korea2
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43kMarine Sediment from the Berkeley Bay Targeted Locus (Loci)
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39kNorth Pacific Subtropical Gyre Microbial Community
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39kADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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39kComparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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38kUS East Coast Salt Marshes Targeted Locus (Loci)
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38kQueensland Marine Sediment
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37kWater and Sediment samples Targeted loci environmental
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37kADDOMEx
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37kSea spray aerosols at Three California Beaches
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34kAbundance, diversity and distribution of Legionellales in wet environments in Sweden
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34kSeasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean
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34kProtist Diversity in the East China Sea
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33kMicrobial diversity in the Tongyeong-Geoje coastal area of Korea
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33kCalifornia Current Cruise CCE-P1408 Process Cruise #6
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33kDiversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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32kZooplankton communities in the coastal water of northeastern Hokkaido
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31kINVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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31kEffects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem
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30kMarine metagenome Targeted loci environmental
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28kMediterranean Contaminated Pelagic communities
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28kMeta_Kosmos
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27kTemporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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27kBacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia
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26kMicrobial Processes and Biodiversity: OCEAN
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26kPo river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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26kMicrobial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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25kMicrobial biogeography of French caves
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24kAmplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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24kEffect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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23kRed Sea Zooplankton Raw sequence reads
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23kmarine sediment metagenome Targeted loci environmental
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22kThis workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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22keDNA_Subseafloor
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22kNuunat- ORMS formation during oil biodegradation at low temperature
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22kMicrobial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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22kCARBOM cruise 2013 flow cytometry sorted phytoplankton
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21kPelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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21kBaltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci)
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20kVariations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea
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20kHydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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19kBacterial 16S rRNA gene sequencing of Antarctic soil
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19kDiet analysis of Japanese sardine and Pacific round herring larvae
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19kIMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER
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18k16S amplicons Subtropical Frontal Zone New Zealand
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18kLife in a toxic environment
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18kEffect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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18kOceanic microplankton do not adhere to the latitudinal diversity gradient
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18k16S data describing Antarctic benthic sediment
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18kGulf of Mexico open ocean Targeted Locus (Loci)
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17kMicrobial community in marine sediments
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17kMicrobial diversity in the Tongyeong-Geoje coastal area of Korea
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17kAbyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental
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16kMarine sediment metagenome raw sequence reads
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16kCaspian Sea Sediment - 16S Survey Targeted Locus (Loci)
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16kLimited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters
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16kPatagonian fjord prokaryote community
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15kaquatic bacterial metagenome Raw sequence reads
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15kNorthern Gulf of Mexico Hypoxic Zone Raw sequence reads
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15kA practical introduction to microbial molecular ecology through the use of iChips
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15kMarine sediment Raw sequence reads
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15kIncubation of marine methane seep sediments with a bioorthogonal amino acid
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15kBaselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015
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14kCoastal seawater influenced by the municipal effluents Raw sequence reads
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14kA long-standing complex tropical dipole shapes marine microbial biogeography
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14kDiversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan
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14k16S_Sediment_Bolinao
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14kSpirulina necromass degradartion in arctic marine sediments
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13kMicrobiome profiling Schlöppnerbrunnen peat cores from different depths
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13kSea water sample Targeted Locus (Loci)
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13kIntertidal Mixing Zone Targeted Locus (Loci)
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13kCCA_pathobiome
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13kTaxonomic study of endospores in a marine sediment
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13kBacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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13kCommunity structure of Archaea in the western North Pacific and the Arctic Ocean
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13kSanta Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis
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12kmarine metagenome Raw sequence reads
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12kmarine sediment metagenome Raw sequence reads
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12kthe assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays
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12kSediment bacteria in the Southern Ocean
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12kPelagic Gulf of Mexico Targeted loci environmental
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12kArctic Ocean
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12kThermophilic endospores in temperate sediments
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11kBacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan)
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11kCascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean
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11kUncultured eukaryotes Targeted Locus (Loci)
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10kSouthern Ocean microorganisms Targeted Locus (Loci)
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10kBacteria in domestic water-storage containers with or without mosquito larvae
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10kComparison of marine sediments from the Beguela upwelling zone
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10kphotoautotrophic_biofilm
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10kMarine bacteria metagenome
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9kDiet analysis of Pacific Bluefin Tuna larvae
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9kresuscitation mechanisms during enrichment culture
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9kmarine sediment metagenome Raw sequence reads
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9kEukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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9kTransplant and re-transplant microcosms of Baltic Proper and Bothnian Sea bacterioplankton Targeted Locus (Loci)
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9kEquatorial Pacific Ocean Targeted loci environmental
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9k16S rRNA amplicon from marine Bacteria Raw sequence reads
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9kGroundwater microbiome
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8kMicrobial associations in temperate marine copepods from the Gulf of Maine
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8kGulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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8kSouth China Sea interfaces 16S amplicon sequencing
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8kArctic first-year drift ice and under-ice water bacterial communities
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8kStandard filtration practices significantly distort planktonic microbial diversity estimates
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8kSAR amplicon from community incubated with various nanophytoplankton in microcosm
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8kDark ocean microbial diversity
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7kDiversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay
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7kXylophaga in situ Eclusion Experiment
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7kGlobal Malaspina 2010 deep ocean expedition - rRNA pyrotags
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7kMicrobial communities in marine surface water
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7kAmundsen Gulf Overwintering Eukaryote Community
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7kStudies of marine microbial dark matter
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7kmarine sediment metagenome Targeted loci environmental
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6kCoral or reef-seawater associated bacteria Targeted Locus (Loci)
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6kDistribution of the Roseobacter clade
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6kWhite sea picoplankton Metagenome
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6kMicrobial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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6kDiversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)
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6kBaltic Sea
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6kGreen Edge microcosms Raw sequence reads
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6k16S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper
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6kEnvironmental zooplankton Targeted Locus (Loci)
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6kmarine sediment metagenome Metagenome
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6kMarine metagenome ICM_JRV
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6kMiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments
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6kMicrobial eukaryotes
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5kSpecies-specific associations between bacterioplankton and photosynthetic picoeukaryotes
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5kProkaryotic community response to microalgal lysates
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5kwater Raw sequence reads
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5kComparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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5kMunicipal Pensacola Beach Sand Metagenome
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5kSubmarine Ligurian Canyons Water Prokaryotic and Protist Communities
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5kMarine methane seep Targeted Locus (Loci)
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5kTrichodesmium spiralis associated microbiome Targeted loci
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5kDissolved compounds excreted by copepods reshape the diversity and the activity of marine bacterioplankton community
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5kE1 Targeted Locus (Loci)
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5kSeawater Targeted Locus (Loci)
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5kNitrate-storing microorganisms in sediments of the Bornholm Basin
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5kBiogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea
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5kDDCA-metagenome
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5kBacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy)
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5kMetagenomic investigation of six depths from the anchialine Bundera sinkhole
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4kYarwun Port Curtis Sediment Bacterial 16S rRNA (V6) 454 sequence
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4kShotgun metagenomic analysis of Lake Paajarvi sediment microbes.
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4kmarine metagenome Targeted Locus (Loci)
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4kMarine metagenome ICM_GPS
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4kAtlantic salmon microbiota
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4kMetagenomic community analysis of marine zooplankton using two plankton nets
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4kMarine bacteria Targeted Locus (Loci)
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4kAarhus Bay sediment PCR amplified product sequencing
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4kVibrio-specific 16S rRNA sequences from seawater, sediment, and oyster hatchery samples
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4kWhale fall
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4kArchaea
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4kpeptide incubation in GOM C6 seawater bacteria Metagenome
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4kMediterranean mud volcano flow Targeted loci
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3kBacterial diversity in the South Adriatic Sea during winter of 2016
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3kuncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads
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3kAntarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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3kMicrobial communities associated with ferromanganese nodules and the surrounding sediments
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3kSea water microorganisms Raw sequence reads
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3k15N methylamine SIP (WCO station L4)
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3kMetagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools
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3kdsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment
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3kShotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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3kMetagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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3kSurface ocean Targeted Locus (Loci)
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3kCTD water column metabarcoding
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3kMesocosm Targeted Locus (Loci)
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2k16S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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2kBacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans
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2kDistribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin)
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2ksea water Picoeukaryotic Community Raw sequence reads Raw sequence reads
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2kNorthern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea
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2k16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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2kAllDist Targeted Locus (Loci)
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2karchaeal community in Haima cold seep in SCS
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2kmarine sediment metagenome Raw sequence reads
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2kCoastal eutrophication controls the bacterial community composition in different reef habitats of the Spermonde Archipelago, Indonesia.
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2kMagdalen Island Spatio Temporal (MIST) Raw sequence reads
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2kuncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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2kblocking PCR amplification of metazoan DNA for protistan diversity
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2kMicrobial diversity associated with copepods in the North Atlantic subtropical gyre
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2kOcean Acidification baceria sample Targeted loci environmental
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2kSediment Metagenome
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2kComparison of copper contaminated soils, with similar uncontaminated controls.
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2kDiversity and composition of sediment microbial assemblages in an Atlantic port environment
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2kDiversity and abundance of Bathyarchaeota (MCG) in South China Sea sediments and the implication of its ecological roles
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2kMicrocosms Metagenome
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2kMarine Metagenome
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2kenvinronment Metagenome
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2kA Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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2kResearch on Airborne Ice Nucleating Species
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2kgas hydrate bearing sediment Raw sequence reads
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2kMetagenome analysis of picoeukaryotes from surface seawater
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2kDistinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater
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2krDNA amplicon sequencing of Western North Atlantic microbial community
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2kA study on microbial functional groups producing a climate related gas in the ocean
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1kSouthern Ocean
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1kSediment Microcosm Metagenome
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1kSeawater bacteria Metagenome
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1kDeep mud-volcano biosphere in the Nankai accretionary wedge
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1kVAG Mine Pit Pond Metagenome
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1k3Soil16S
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1kBrdU_MAB_SS Metagenome
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1ksuspended particulate matter Raw sequence reads
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1kMarine subseafloor sediment Targeted Locus (Loci)
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1kDistributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon
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1kProspecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia
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1kOcean Water Metagenome
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1kMetagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.
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1kOcean sediment-basement interface Targeted Locus (Loci)
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1kMicrobial diversity of marine sediments from Ross Sea
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1kOcean crust Targeted Locus (Loci)
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1kmarine sediment metagenome Raw sequence reads
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1k16S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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1kMicrobial diversity studies of Arabian Sea sediment
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1kGlobal Ocean Sampling Expedition
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1kMicrobial Diversity in Antarctic marine sediments (Admiralty Bay and Bransfield Strait)
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1kHydrothermal Deposit Targeted Locus (Loci)
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1kuncultured marine eukaryote Targeted loci environmental
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1kMarine planktonic ciliates: SSU rDNA
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977Habitat and host related variation in sponge bacterial communities in Indonesian coral reefs and marine lakes
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869ocean bacteria Metagenomic assembly
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840Diversity, Ecology and Biogeochemistry of cyst-forming acantharia (Radiolaria) in the oceans
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835Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads
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823marine Archaea metagenome
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804Microbial induced mineral precipitations caused by nitrate treatment for souring control during microbial enhanced oil recovery (MEOR)
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795UK coast natural seawater Genome sequencing
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671De novo whole metagenome sequencing studies
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631Anammox bacteria in sediment cores of Daya Bay, China
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622Metagenomic sequence from soil bacteria
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610Hatteras return: Oligotrich and choreotrich ciliates diversity at small scales
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582Marine metagenome ICM_LCR
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526Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)
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477Blue Mountains Swamp Archaea
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442Anammox bacteria in surface sediments of South China Sea
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435Marine metagenome ICM_AWP
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324Porcupine Seabight 16S Ribosomal RNA
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301Marine sediment metagenome ICM_GMS
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299Metabolically active microbial communities in marine sediment under high-CO2 and low-pH extremes
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284Protists tag sequencing of 18S rRNA HV 9
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277Archaea diversity in marine sediment
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273Preservation of ancient eukaryotic DNA in methane hydrate-associated marine sediments.
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262SCS SEATS Raw sequence reads
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246Marine sediment metagenome ICM_FIS
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167Diesel contamination of Antarctic soils and sediments
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136Mount Hope Bay bacteria Targeted Locus (Loci)
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126Archaea Arctic Ocean Survey Targeted Locus (Loci)
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91Seawater Metagenome
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86Accuracy of protist diversity assessments: morphology compared to cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study
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58Marine sediment metagenome ICM_NZS
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51Diversity and structure of benthic bacterial community from South-Eastern Pacific Ocean, Targeted Locus (Loci)
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51Marine metagenome ICM_VAG
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50nifH diversity in the North Pacific Ocean
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14Lane 6 Analysis
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10Mediterranean Bathypelagic Habitat