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GBIF.org (19 March 2023) GBIF Occurrence Download https://doi.org/10.15468/dl.sqydbw
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Латинское название
Variovorax Willems et al., 1991
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952Bacterial members of the Pinus pinaster rhizosphere microbiota in a forest subjected to drought conditions
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547Global soil microbiomes: A new frontline of biome-ecology research
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270Soil microbial distribution
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249Bacerial and archaeal diversity in Central Park
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246Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils
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140Compost microbe establishment and growth in agricultural soils
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140Marine metagenomes Metagenome
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13816S amplicons New Zealand agricultural soils
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133uncultured prokaryote Targeted loci environmental
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109Organic agricultural field soil Raw sequence reads
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98INSDC Sequences
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91Response of soil bacteria to anthropogenic soil variables at large spatial scales
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79INSDC Host Organism Sequences
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77INSDC Environment Sample Sequences
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72Temporal variation in pesticide biodegradation
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72Niche partitioning of methanotrophs in stratified lakes
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71Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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59Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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49Trace element-contaminated soil Metagenome
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48Sediment surface microbial community changes due to phytoplankton addition
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45Mapping and Predictive Variations of Soil Bacterial Richness across French National Territory
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40Microbial communities associated with Eurasian watermilfoil, water and sediment
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38marine metagenome Metagenome
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30Bacterial diversity and community composition in grassland and forest soils of the German Biodiversity Exploratories
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30DSMZ Prokarya Collection Catalogue
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27Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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26Soil bacterial communities (Hainich National Park)
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26Non-target effects of Metarhizium brunneum on soil microbial communities
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21Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO
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20flora & fauna(NIBR)
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19Varennes Communities in Contaminated Soils
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19Taxonomic study of endospores in a marine sediment
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19Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan)
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18MICROBIS database
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17Lancang-Mekong microbiome project 16S rRNA metabarcode (March - December 2021)
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17A practical introduction to microbial molecular ecology through the use of iChips
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16Soil metagenome from healthy and unhealthy agricultural soil
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15Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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15Raw sequence reads from soil relic DNA study
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13EGB sediment data (raw sequence reads)
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13Japan Collection of Microorganisms, RIKEN BioResource Center
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13MGYS00005313
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13BCCM/LMG Bacteria collection
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13Microbial biogeography of 925 geothermal springs in New Zealand
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11Rifle sediment bacterial community Targeted Locus (Loci)
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11Impact of sulfamethoxazole on the microbial community of a riverine environment
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11Coral
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10Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study)
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10Pristine and TNT contaminated (tilled and untilled) soils
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8Lake Washington sediment enrichments
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7Shotgun metagenome sequences of Anthelia biocrust samples.
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7Microbial diversity in benthic stream sediment
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7Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads
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7marine sediment metagenome Raw sequence reads
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7FBIP: Diversities of microbiomes from South African arid and natural soils
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7Shotgun Metagenome Sequencing of Lake Soyang
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7Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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7Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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6Marine metagenomes from the bioGEOTRACES project
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6DSMZ Bacteria
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6The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils
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6Life in a toxic environment
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5Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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5soil metagenome Raw sequence reads
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5Soil Microbial communities from weed germination bioassay targeted loci environmental
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5FBIP: Survey of invertebrate and microbial diversity of the Prince Edward Islands system
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5NIAES microbial inventory, "microForce" microbe collection, Tsukuba, National Institute for Agro-Environmental Sciences, Japan
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5Depth profile of ancient sediments
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5North Pacific Subtropical Gyre Microbial Community
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5Microbial diversity of marine sediments
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5Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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5Bacterial Biomarkers of Marcellus Shale Activity in Pennsylvania
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4Deep Subsurface Basalts Targeted Locus (Loci)
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4marine sediment metagenome Metagenome
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4Sewer sediments Targeted loci environmental
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4Comparison of marine sediments from the Beguela upwelling zone
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4Bacterial communities in agricultural soils under contrasting agronomic managements and biomes of Argentina
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3Spatial and environmental variation in whole microbial communities in Fildes Bay, King George Island, Antarctica Raw sequence reads
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3Sediment metagenome
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3seawater metagenome Metagenome
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3Comparison of copper contaminated soils, with similar uncontaminated controls.
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3Genetic potential for pentachlorophenol degradation at historically contaminated groundwater sites
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3International Collection of Microorganisms from Plants (ICMP)
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3Bacterial biogeography of a High Arctic ice cap
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3Lake sediment sequencing
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3Aldegondabreen cryoconite Targeted Locus
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3Colección de Microorganismos endófitos aislados de plantas de banano (Musa sp)
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3sediment metagenome Metagenome
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3Heterotrophic bacterial diversity in aquatic microbial mat communities from Antarctica
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3Baltic Expression Project
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3Microbial associations in temperate marine copepods from the Gulf of Maine
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3Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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3Bacteria exposure experiment North Sea
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3soil bacteria and fungi Targeted loci environmental
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3It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.
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3Centre de Ressources Biologiques de l'Institut Pasteur
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3Plant niche rather than soil or species shapes the microbiota
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3Colección de Microorganismos del Grupo de Investigación de Ecología Microbiana y Bioprospección
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2Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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2Tucurui_Metagenoma_MGRAST
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2Sediment bacterial 16S in Hachiro polder.
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2Queensland Marine Sediment
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2Macroalgal Morphology affects composition and settlement of microbial communities
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2Bacterial 16S rRNA gene sequencing of Antarctic soil
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2Bacteria Collection in BCRC
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2Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation
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2Limited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters
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2permafrost metagenome Targeted loci environmental
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2Fiocruz/CBAS - Coleção de Bactérias do Ambiente e Saúde
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2Bacterial 5S Ribosomal RNA RefSeq Targeted Loci Project
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2Japan Collection of Microorganisms(Bacteria)
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216S rRNA genes Random survey
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2CCA_pathobiome
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2Bacteria in domestic water-storage containers with or without mosquito larvae
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2VKM Microbial Cultures from Former USSR
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2Metabarcoding surveys of the Arctic marine environment
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2Meta_Kosmos
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2magnetite Targeted Locus (Loci)
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2Arctic first-year drift ice and under-ice water bacterial communities
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2Sea spray aerosols at Three California Beaches
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2Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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2Bacteria in Anopheles darlingi breeding sites in Manaus, the Amazon, Brazil
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2Bacterial 23S Ribosomal RNA RefSeq Targeted Loci Project
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216S rDNA metagenomes of Western Balkans glacial lakes sediments
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1Ocean sediment-basement interface Targeted Locus (Loci)
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1Thermophilic endospores in temperate sediments
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1MeHg Coal Ash
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1DOW-2
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1Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
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1marine sediment metagenome Targeted loci environmental
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1EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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1Novel Biphenyl Oxidizing Bacteria and Dioxygenase Genes from a Korean Tidal Mudflat
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1Metagenome from mudbank Area,Alappuzha Kerala India
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1Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes
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1Svalbard Targeted Locus (Loci)
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1marine sediment metagenome Targeted loci environmental
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1PCB-contaminated sediment Genome sequencing
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1Bacterial community profiles in a bioreduced uranium contaminated site after reoxidation
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1Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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1eDNA_Subseafloor
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1DSW-2
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1Impact of Plant Development on Structure and Function of Rhizosphere Microbial Community associated with Groundnut (Arachis hypogaea L.)
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1Metagenomic sequence from soil bacteria
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1iNaturalist Research-grade Observations
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1Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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1Marine methane seep Targeted Locus (Loci)
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1Temperature shifts simulating secondary oil recovery
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1Cryoconite sediments Targeted Locus (Loci)
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1Microbial biogeography of French caves
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1flora&fauna(NIBR)2019
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1Atlantic salmon microbiota
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1Assessing the microbial diversity in Cape Comorin ocean water
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1marine metagenome
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1This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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1marine metagenome Metagenome
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1Soil microbial response to organic disturbances
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1Uncultered bacterium Targeted Locus (Loci)
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1Arctic microbiome along Svalbard Cross Shelf transects
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1VAG Mine Pit Pond Metagenome
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1Patagonian fjord prokaryote community
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1the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays
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1Vertical profiles of bacterial community diversity in a drinking water reservoir
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1Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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1ATCC Bacteria Collection Catalog
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1CCUG Microorganisms databases(Bacteria)
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1IFO Bacteria database
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1Marine sediment amplicon Targeted loci environmental
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1Marine Sediment from the Berkeley Bay Targeted Locus (Loci)
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1Characteristics of bacterial communities in the deep sediment Lake Baikal from the regions with oil and gases discharging
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1gas hydrate bearing sediment Raw sequence reads
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1Marine sediment metagenome
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1Uncultured Environmental Isolate Targeted loci environmental
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1Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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1Zooplankton microbiome of the Amazon River Plume and western trophic North Atlantic
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116S rRNA amplicon sequences of Baltic Sea bacterioplankton
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1Indian_sediments
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1Transplant and re-transplant microcosms of Baltic Proper and Bothnian Sea bacterioplankton Targeted Locus (Loci)
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1Impact of rainforest transformation on phylogenetic and functional diversity of soil prokaryotic communities in Sumatra (Indonesia)
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1Biodiversidad identificada por medio de metabarcoding asociada al proyecto piloto de investigación integral - PPII Platero, departamento de Santander
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1Marine plankton Metagenome
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1Camargue soil and sediment 16S community profiling
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1Assembly and activity of microbial communities in the Pacific temperate rainforest
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1Metagenomics Cabo Rojo Salterns
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1uncultured prokaryote Metagenome
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1CEFS_16S_ITS
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1Green alder encroachment shapes microbial diversity in subalpine soils.
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1Cave sediment Metagenome
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1Microbial ecology of bacteiral community in sediment from adjacent waters of Rushan Bay
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1Metagenomics of Jacarepagua Lagoon
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1Nahant Collection
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1Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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1There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work
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1CARBOM cruise 2013 flow cytometry sorted phytoplankton
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1Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci)
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1Variation in freshwater stream sediment community 16S rRNA profiles along an urbanization gradient
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1Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.
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1Bacterial community of river sediment enriched with polycyclic aromatic hydrocarbons
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1dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment