Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for prokaryotes or protist.
Citation
MGnify (2020). Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for prokaryotes or protist.. Sampling event dataset https://doi.org/10.15468/4ganar accessed via GBIF.org on 2024-12-14.Description
Seawater was filtered from different depths to retain small and large cell sizes (Protists and bacteria Organisms). The DNA was extracted and amplified by PCR.Sampling Description
Sampling
Seawater was filtered from different depths to retain small and large cell sizes (Protists and bacteria Organisms). The DNA was extracted and amplified by PCR.Method steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/5.0
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
- Tully BJ, Sachdeva R, Graham ED, Heidelberg JF. 2017. 290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology. PeerJ vol. 5 - DOI:10.7717/peerj.3558
Contacts
originatorThe French National Sequencing Center (Genoscope)
Le Ponant Building D - 25 rue Leblanc
PARIS - RCS B 775 685 019
75015
FR
Telephone: +33 (0) 1 64 50 20 59
metadata author
The French National Sequencing Center (Genoscope)
Le Ponant Building D - 25 rue Leblanc
PARIS - RCS B 775 685 019
75015
FR
Telephone: +33 (0) 1 64 50 20 59
administrative point of contact
The French National Sequencing Center (Genoscope)
Le Ponant Building D - 25 rue Leblanc
PARIS - RCS B 775 685 019
75015
FR
Telephone: +33 (0) 1 64 50 20 59