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GBIF.org (18 December 2019) GBIF Occurrence Download https://doi.org/10.15468/dl.szp1si
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Download as TSV
-
163Nutrient addition mesocosm experiment Targeted Locus (Loci)
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26Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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6Surface ocean Targeted Locus (Loci)
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1Red Sea sediment 2011 Targeted Locus (Loci)
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6Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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1Uncultured marine eukaryotes Targeted Locus (Loci)
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238kGeographically tagged INSDC sequences
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3Marine metagenome ICM_AWP
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1Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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4Global phylogeography survey of thermophilic spores in marine sediments.
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8How much do we know about marine metazoan biodiversity? Recent disclosures using second generation sequencing.
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921South Australian Museum Australia provider for OZCAM
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8Tejidos de la expedición en el páramo el Valle, Boyacá - Proyecto Boyacá BIO
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3Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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11Meiobenthos nSSU metagenetic meiobenthic data
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50Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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112Diet analysis of Pacific Bluefin Tuna larvae
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1Fringing reef Metagenome
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466SOLA Raw sequence reads
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5Southern Ocean microorganisms Targeted Locus (Loci)
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76Exploring Fronts With Multiple Robots – Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
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18North Sea plastic incubation and reference communities, raw sequence reads
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15Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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382Insects in monitoring oaks in Norway – a pilot study
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59Marine metagenome ICM_JRV
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2kTejidos de insectos recolectados en trampas Malaise en los departamentos de Santander, Antioquia y Vichada - Proyecto Colombia Bio
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1Guaymas Basin and Sonora Margin sediment Targeted loci
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1particle-attached and free-living bacteria kongsfjorden
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44kInsects from light trap (1992–2009), rooftop Zoological Museum, Copenhagen
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25Tejidos de la desembocadura del caño Teracay en el río Tomo, Puerto Carreño, Vichada - Proyecto Colombia Bio
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8Microbial biogeography of French caves
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11Saltern of Margherita di Savoia Metagenome
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67Environmental eukaryotes Metagenome
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13Amplicon-Based Illumina Sequencing Reveals High Diversity of Phytoplankton in the Coastal Waters of Qinhuangdao
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1kNahant Collection
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1Foraminifera 18S rDNA and rRNA diversity for fish farms biomonitoring
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455Deer Creek Riparian Restoration Ecological Monitoring
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17rDNA amplicon sequencing of Western North Atlantic microbial community
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6Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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2Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea
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245Zooplankton communities in the coastal water of northeastern Hokkaido
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2marine sediment metagenome Targeted loci environmental
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1Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.
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1Microbial eukaryotes Metagenome
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19Nanticoke Harbour, ON, Canada (plankton SSU 454 sequencing)
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4Microbial Community Diversity Response to a Changing Arctic Ocean
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4kSaproxylic and herbivorous beetle species in old near-natural and old managed forests in south-eastern Norway
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31Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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1water Raw sequence reads
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6Active microbial eukaryotes amidst a marine subsurface RNA paleome
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3A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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12Amundsen Gulf Overwintering Eukaryote Community
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12marine metagenome Raw sequence reads
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1Copepod induced bacterial community Raw sequence reads
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159Microbial communities in the ocean Raw sequence reads
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10Magadalen Islands Spatio Temporal (MIST) Large Fraction
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1Microbiome profiling Schlöppnerbrunnen peat cores from different depths
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1Community structure of Archaea in the western North Pacific and the Arctic Ocean
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3Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing
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32Microbial eukaryote 454 Roche sequencing in estuarine ecosystems
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1Westmead Mycology Culture Collection
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55Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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5microbial community diversities of Tuosu Lake
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9kAmplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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32Coral
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222V-SMAR-TVG10 Targeted Locus (Loci)
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41kEffects of vegetation clearing and dead wood on beetles in power line clearings southeast Norway
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416S rDNA amplicon of Bacteria and Archaea Metagenome
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54White sea picoplankton Metagenome
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18Marine metagenome ICM_WBS
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1deep marine subsurface Raw sequence reads
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1A long-standing complex tropical dipole shapes marine microbial biogeography
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17Marine sediment metagenome ICM_DSE
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27Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
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1kBumble bees collected in a large-scale field experiment in power line clearings, southeast Norway
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1Archaea
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1the under-explored coal gangue and the adjacent acid mine drainage creek soil Raw sequence reads
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177marine sediment metagenome Metagenome
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9Microbial eukaryotes present in a Norwegian coastal ecosystem and in the gut content of Calanus copepods from Raunefjorden
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4Microbial diversity of marine sediments
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5Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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14Biological rejuvenation of iron oxides in bioturbated marine sediments
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9Ascidian and Seawater Metagenome
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6Bayside Harbour, NS, Canada (plankton SSU library 454 sequencing)
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7marine sediment Raw sequence reads
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449Colección de Tejidos del Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH-CT)
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229Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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1Arctic Ocean
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33Microbial communities in estuarine sediments
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18uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads
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6DOW-2
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1Metagenome microbial communities of bottom sediments of the Kara Sea
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6sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads
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1bacterial community in the deep-sea surface sediments
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3Marine subseafloor sediment Targeted Locus (Loci)
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18Microbial communities in the phycosphere environment
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16Seawater metagenome Targeted loci environmental
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12Indian_sediments
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4Municipal Pensacola Beach Sand Metagenome
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4Enrichment of organohalide respiring bacteria
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23kMarine metagenomes Metagenome
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4soil bacteria and fungi Targeted loci environmental
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147Red Sea Zooplankton Raw sequence reads
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441Red Sea microbial plankton Raw sequence reads
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1DSW-2
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916Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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4seawater metagenome Metagenome
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13Plankton sample collected from Nanaimo Harbour Targeted Locus (Loci)
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19Nitrate-storing microorganisms in sediments of the Bornholm Basin
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65Research on Airborne Ice Nucleating Species
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3Marine sediment Raw sequence reads
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1Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)
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1Mediterranean mud volcano flow Targeted loci
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1SCHEMA_Sediment
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163Marine sediment metagenome raw sequence reads
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26Marine metagenome ICM_GPS
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297Sediment Metagenome Raw sequence reads
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10Microbial community of Red Sea (16S amplicon) Targeted Locus (Loci)
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3Metagenomic investigation of six depths from the anchialine Bundera sinkhole
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111778-1998 Ivor Rees North Wales Marine Fauna Ad-hoc sightings shore and ship-based surveys
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6Tejidos colectados en la expedición al municipio Santa Bárbara, Santander - Proyecto Santander BIO
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1NEW-2
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125Sea ice and seawater Raw sequence reads
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6Whale fall
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18Beetles on polypores at 4 sites in Norway
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516S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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3Microbial diversity associated with copepods in the North Atlantic subtropical gyre
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87Polymetallic nodule field Targeted loci environmental
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36Eukaryotic protists Metagenome
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20DGGE analysis of the structure of fungal communities associated to leaf litter and the gut of larvae of Triplectides (Trichoptera: Leptoceridae) in Atlantic Forest streams
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9Metazoan sequencing
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43Uncultured eukaryotes Targeted Locus (Loci)
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9Meise Botanic Garden Herbarium (BR)
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10Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.
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18Queensland Marine Sediment
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4Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)
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1Salt marshes sediment microhabitats Metagenome
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1marine sediment metagenome Targeted Locus (Loci)
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1kNational Benthic Inventory
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2Microbial community in PAH-contaminated riverine sediments
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1Marine metagenome ICM_LCR
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3marine metagenome Raw sequence reads
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13Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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8Protistan plankton diversity along salt gradient
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10Bacteria community in the southern East China Sea
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23Fungal diversity in Sanya mangrove sediments, China
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25Soil metagenome from healthy and unhealthy agricultural soil
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12Magdalen Island Spatio Temporal (MIST) Raw sequence reads
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1Marine metagenome ICM_ABR
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1Loihi Seamount Targeted loci environmental
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7Protists in Havre-aux-Maisons Lagoon, Magdalen Islands, Quebec, Canada
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1Bacterial 16S rRNA gene sequencing of Antarctic soil
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321Water and Sediment samples Targeted loci environmental
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23Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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5The Nanoeukaryotic plankton Raw sequence reads
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3Lake sediment sequencing
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46The Indigo Project: a global citizen science Ocean survey
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163Saproxylic insects caught in window traps and hatched from polypores in small and large old forests in southern Norway
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5Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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41Sediment river Genome sequencing and assembly
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13Metagenomic community analysis of marine zooplankton using two plankton nets
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8Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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8Arctic microbiome along Svalbard Cross Shelf transects
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3Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing
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140Marine Water Column Samples Targeted loci environmental
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326INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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296Protists community in the southern East China Sea
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1L''Atalante sediment - Extracellular Metagenome
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1microbial diversity Raw sequence reads
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77Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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1Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC
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1resuscitation mechanisms during enrichment culture
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324Diet analysis of Japanese sardine and Pacific round herring larvae
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4uncultured marine eukaryote Targeted loci environmental
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290Phytoplankton and zooplankton diversity of 18 lakes of the lacustrine system of the Middle Rio Doce
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2California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental
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147Tejidos de los bosques montanos del Oriente Antioqueño, Cañón del río Melcocho, en el municipio de El Carmen de Viboral, Antioquia - Proyecto Colombia BIO
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67sediment metagenome Metagenome
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15Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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1Metagenome analysis of picoeukaryotes from surface seawater
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404Bee species and numbers caught by coloured pan traps across 20 landscapes in 2012, The Netherlands
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71Tejidos de ejemplares colectados en el Páramo de Chingaza - Proyecto Colombia Bio
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2Marine eukaryotes Targeted loci environmental
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3magnetite Targeted Locus (Loci)
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4Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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302CARBOM cruise 2013 flow cytometry sorted phytoplankton
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56DNA barcodes from century-old type specimens using next-generation sequencing
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21sediment metagenome Raw sequence reads
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135Microbial Processes and Biodiversity: OCEAN
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3kEMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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2marine sediment metagenome Raw sequence reads
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2Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing
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701915-2016 Department for Environment Food & Rural Affairs (Defra), Marine Strategy Framework Directive (MSFD) Collation of invasive non-indigenous species
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1Taxonomic composition of microbial communities in coastal Arctic sediments
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1Marine sediment metagenome ICM_CFU
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3Marine sample from an Antarctic Bay Raw sequence reads
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55Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site
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21Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins
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290Extracellular DNA marine sediment Targeted Locus (Loci)
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59Sediment of acid mine drainage Targeted loci environmental
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17Tejidos colectados en la expedición al municipio Cimitarra, Santander - Proyecto Santander BIO
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18SAR amplicon from community incubated with various nanophytoplankton in microcosm
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9Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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13Tejidos colectados en la expedición al municipio El Carmen de Chucurí, Santander - Proyecto Santander BIO
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67sediment metagenome Metagenome
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12marine metagenome Targeted Locus (Loci)
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1Microbial community diversity in Arctic marine sediments and Planktonic microbial
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3Ocean sediment-basement interface Targeted Locus (Loci)
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12Tejidos de sistemas cársticos en el municipio de El Peñón, Santander - Proyecto Colombia BIO
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8Marine protists Metagenome
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3uncultured eukaryote Raw sequence reads
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1Depth dependent (0-5,000 m) and seasonal variability in archaeal community structure in the subarctic and subtropical western North Pacific.
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3Diversity of Microbial Eukaryotes in Sea Waters From Fildes Peninsula,King George Island, Antarctica
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5kSolitary Bees and Bumblebees in a Danish Agricultural Landscape - data from PhD-study
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496sediment metagenome Raw sequence reads
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1Mount Hope Bay bacteria Targeted Locus (Loci)
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8Sediment Microcosm Metagenome
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3Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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1Sediment metagenome
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12Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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1Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia
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441ARMS Jeddah sample Raw sequence reads
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4uncultured prokaryote Targeted loci environmental
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6Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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12Environmental zooplankton Targeted Locus (Loci)
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3marine metagenome Raw sequence reads
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46Eukaryote diversity assessment of sediments of the Western English Channel
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4MInternational Barcode of Life project (iBOL)
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21Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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85Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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1envinronment Metagenome
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1Chandeleur Island 2016 Amplicon Study Raw sequence reads
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2Microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard.
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4Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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2VAG Mine Pit Pond Metagenome
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51uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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3Gulf of Mexico open ocean Targeted Locus (Loci)
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2Comparison of copper contaminated soils, with similar uncontaminated controls.
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14Assessing the microbial diversity in Cape Comorin ocean water
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855Beetles in hollow oaks in Vestfold, Telemark and Agder collected with alcohol-baited traps
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533California Current Cruise CCE-P1408 Process Cruise #6
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601Protist Diversity in the East China Sea
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1ocean bacteria Metagenomic assembly
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1Microbial eukaryote community structure during early phytoplankton blooms in the naturally iron-fertilized Kerguelen area (Southern Ocean) Targeted Locus (Loci)