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GBIF.org (12 November 2021) GBIF Occurrence Download https://doi.org/10.15468/dl.66wte9
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Pectobacterium Waldee, 1945
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1kINSDC Sequences
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990INSDC Host Organism Sequences
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265Marine metagenomes Metagenome
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252Genebank, National Institute of Agrobiological Sciences
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244International Collection of Microorganisms from Plants (ICMP)
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230Collection Francaise de Bacteries Phytopathogenes
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182BCCM/LMG Bacteria collection
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142GSPB Prokarya Catalogue
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116Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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74MICROBIS database
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59anchialine metagenome Raw sequence reads
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45uncultured prokaryote Targeted loci environmental
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44CABI Bioscience Fungus Collection
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42CABI Bioscience Genetic Resource Collection
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37Soil Microbial communities from weed germination bioassay targeted loci environmental
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33Bacteria Collection in BCRC
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26Microbial biogeography of 925 geothermal springs in New Zealand
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24DSMZ Prokarya Collection Catalogue
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20Nahant Collection
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19Microbial communities associated with Eurasian watermilfoil, water and sediment
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17Sea spray aerosols at Three California Beaches
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16DSMZ Bacteria
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11INSDC Environment Sample Sequences
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10marine metagenome Metagenome
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9Temporal variation in pesticide biodegradation
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9Organic agricultural field soil Raw sequence reads
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9Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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8Microbial diversity of marine sediments
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8flora & fauna(NIBR)
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7EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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7VKM Microbial Cultures from Former USSR
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6MeHg Coal Ash
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6Centre de Ressources Biologiques de l'Institut Pasteur
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5Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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5Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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5Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation
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5Microbial Diversity in the Southwest Atlantic Ocean and Patagonian Freshwater Bodies
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5Marine sediment metagenome
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5Enriched mixed culture from mangrove sediment with capability of producing 1,3-PDO from glycerol genome sequencing and assembly
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5Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
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4Bacerial and archaeal diversity in Central Park
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4Raw sequence reads from soil relic DNA study
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4ATCC Bacteria Collection Catalog
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4Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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3Saltern of Margherita di Savoia Metagenome
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3Sewer sediments Targeted loci environmental
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3Groundwater microbiome
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3Sediment surface microbial community changes due to phytoplankton addition
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3Global phylogeography survey of thermophilic spores in marine sediments.
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316S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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3Japan Collection of Microorganisms, RIKEN BioResource Center
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3Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene
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2Reciprocal transplantation experiment of salt marsh sediments Targeted loci
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216S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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2DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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2Mid-Atlantic Ridge sediment Raw sequence reads
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2Compost microbe establishment and growth in agricultural soils
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2atmospheric depositon effect on bacterial diversity
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2Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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2Marine metagenomes from the bioGEOTRACES project
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2Microbial diversity in the Tongyeong-Geoje coastal area of Korea2
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2flora&fauna(NIBR)2019
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2Assessing the microbial diversity in Cape Comorin ocean water
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2DAR AVH data
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2Incubation of marine methane seep sediments with a bioorthogonal amino acid
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2CECT Spanish Type Culture Collection(Bacteria)
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2Temporal effect of plant diversity and oiling on nitrogen cycling in marsh sediments
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2Cepario del Laboratorio de Microbiología y Mutagénesis Ambiental de la UIS
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2Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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2Santander Bio: Cepario del Laboratorio de Microbiología y Mutagénesis Ambiental de la UIS (LMMA)
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2Microbial Processes and Biodiversity: OCEAN
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1Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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1Sediment metagenome
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1Marine sediment Raw sequence reads
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1Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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1Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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1Ascidian and Seawater Metagenome
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1Elaboración de la base de datos de la colección de cepas de bacterias fitopatógenas de la Dirección General de Sanidad Vegetal
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1Illumina high-throughput sequencing of bacterial community
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1rDNA amplicon sequencing of Western North Atlantic microbial community
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1marine sediment metagenome Targeted loci environmental
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1Soil bacterial diversity is associated with human population density in urban greenspaces
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1Microbial communities in the ocean Raw sequence reads
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1Santa Barbara Basin Raw sequence reads
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1Rifle sediment bacterial community Targeted Locus (Loci)
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1Prokaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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1Who eats the tough stuff DNA stable isotope probing (SIP) of bacteria and fungi degrading 13C-labelled lignin and cellulose in forest soils
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1Temporal sampling of marine metagenomes from Station ALOHA and BATS
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1ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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1SOLA Raw sequence reads
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1marine metagenome
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1This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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1Enriched_Iron_Ore_metagenome
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1marine metagenome Metagenome
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1Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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1sediment metagenome Metagenome
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1microbial community composition of marine water and sediment
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1Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns
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1CCUG Microorganisms databases(Bacteria)
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1IFO Bacteria database
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1Japan Collection of Microorganisms(Bacteria)
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1Benham Rise 16S raw sequence reads
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1Composition and Genetic Diversity of Microbial Communities in Subtropical Coastal Wetland Sediments
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1Bacteria in domestic water-storage containers with or without mosquito larvae
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1the under-explored coal gangue and the adjacent acid mine drainage creek soil Raw sequence reads
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1Prokaryotic community structure in the deep Southwest Indian Ocean with an emphasis on actinobacteria Targeted Locus (Loci)
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1marine sediment metagenome Raw sequence reads
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1PAH-contaminated sediment from the Lagos Lagoon, Nigeria
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1Response of soil bacteria to anthropogenic soil variables at large spatial scales
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1Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan
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1Microbial associations in temperate marine copepods from the Gulf of Maine
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1Bacterial community structure and their predicted functions in coastal sediments
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1nirS-Encoding and nirK-Encoding Denitrifiers in the Sediment of Daya Bay Raw sequence reads
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1AT26-10 Crab Spa IGT incubations raw sequence reads
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1Life in a toxic environment
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1Marine Bacteria 16S V4 Raw sequence reads
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1The Indigo Project: a global citizen science Ocean survey
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1Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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1Anaerobic Photosynthetic Consortia 16s rRNA profiling
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1Arctic first-year drift ice and under-ice water bacterial communities
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1Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins
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1Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci)
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1sediment metagenome Raw sequence reads
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1Deep mud-volcano biosphere in the Nankai accretionary wedge
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1Non-target effects of Metarhizium brunneum on soil microbial communities
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1freshwater sediment metagenome Metagenome
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1Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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1Bacteria in Anopheles darlingi breeding sites in Manaus, the Amazon, Brazil
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1New Zealand Fungal and Plant Disease Collection (PDD)
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1Coastal seawater influenced by the municipal effluents Raw sequence reads
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1IPA - Herbário - IPA Dárdano de Andrade Lima
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1Microbial processes in iron-rich sediments of Lake Towuti, Indonesia: Disentangling the methane and iron cycles