Global Ocean Sampling Expedition
Citation
MGnify (2016). Global Ocean Sampling Expedition. Sampling event dataset https://doi.org/10.15468/9k8caf accessed via GBIF.org on 2024-12-15.Description
Collection of metagenomes obtained during the Global Ocean Sampling ExpeditionSampling Description
Sampling
Collection of metagenomes obtained during the Global Ocean Sampling ExpeditionMethod steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
- Nilewski S, Varatnitskaya M, Masuch T, Kusnezowa A, Gellert M, Baumann AF, Lupilov N, Kusnezow W, Koch MH, Eisenacher M, Berkmen M, Lillig CH, Leichert LI. 2021. Functional metagenomics of the thioredoxin superfamily. J Biol Chem vol. 296 - DOI:10.1074/jbc.ra120.016350
- Shin GH, Shin Y, Jung M, Hong JM, Lee S, Subramaniyam S, Noh ES, Shin EH, Park EH, Park JY, Kim YO, Choi KM, Nam BH, Park CI. 2018. First Draft Genome for Red Sea Bream of Family Sparidae. Front Genet vol. 9 - DOI:10.3389/fgene.2018.00643
- Shin Y, Jung M, Shin GH, Jung HJ, Baek SJ, Lee GY, Kang BC, Shim J, Hong JM, Park JY, An CM, Kim YO, Noh JK, Kim JW, Nam BH, Park CI. 2018. First draft genome sequence of the rock bream in the family Oplegnathidae. Sci Data vol. 5 - DOI:10.1038/sdata.2018.234
- Villar E, Vannier T, Vernette C, Lescot M, Cuenca M, Alexandre A, Bachelerie P, Rosnet T, Pelletier E, Sunagawa S, Hingamp P. 2018. The Ocean Gene Atlas: exploring the biogeography of plankton genes online. Nucleic Acids Res vol. 46 - DOI:10.1093/nar/gky376
- Kent AG, Dupont CL, Yooseph S, Martiny AC. 2016. Global biogeography of Prochlorococcus genome diversity in the surface ocean. ISME J vol. 10 - DOI:10.1038/ismej.2015.265
- Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA, Wu D, Paulsen I, Nelson KE, Nelson W, Fouts DE, Levy S, Knap AH, Lomas MW, Nealson K, White O, Peterson J, Hoffman J, Parsons R, Baden-Tillson H, Pfannkoch C, Rogers YH, Smith HO. 2004. Environmental genome shotgun sequencing of the Sargasso Sea. Science vol. 304 - DOI:10.1126/science.1093857
Contacts
originatorJCVI
metadata author
JCVI
administrative point of contact
JCVI