Environmental eukaryotes Metagenome

doi:10.15468/rvslah

Environmental eukaryotes Metagenome

Citation

MGnify (2019). Environmental eukaryotes Metagenome. Sampling event dataset https://doi.org/10.15468/rvslah accessed via GBIF.org on 2024-11-09.

Description

18S sequences from environmental samples using universal eukaryote primers. The goal of the study is to design and test eukaryote specific primers to be used in assessing biodiversity of eukaryotes.

Sampling Description

Sampling

18S sequences from environmental samples using universal eukaryote primers. The goal of the study is to design and test eukaryote specific primers to be used in assessing biodiversity of eukaryotes.

Method steps

Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1

Taxonomic Coverages

Geographic Coverages

Bibliographic Citations

Lanzén A, Lekang K, Jonassen I, Thompson EM, Troedsson C. 2017. DNA extraction replicates improve diversity and compositional dissimilarity in metabarcoding of eukaryotes in marine sediments. PLoS One vol. 12 - DOI:10.1371/journal.pone.0179443

Contacts

originator
University of Bergen

metadata author
University of Bergen

administrative point of contact
University of Bergen