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608kMarine metagenomes Metagenome
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171kNahant Collection
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46kAmplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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44kZostera Marina Ammonification environmental
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38kCoral
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33kEMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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27kMicrobial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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20kDevelopment and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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19kSCHEMA_Sediment
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19kSediment surface microbial community changes due to phytoplankton addition
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18kEffects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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16kBiological Impacts of Ocean Acidification
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16kDEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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16kBacteria exposure experiment North Sea
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15kBacterial 16s Amplicon Sequencing of the Atlantic Ocean
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14k16S Amplicon Data from an Antarctic Cold Seep
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13kmarine sediment metagenome Targeted loci environmental
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13kLittle Sippewissett Marsh Targeted Locus (Loci)
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11kShort-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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11kMacroalgal Morphology affects composition and settlement of microbial communities
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11kPolymetallic nodule field Targeted loci environmental
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11kMicrobial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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10kmarine sediment metagenome Metagenome
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9kReciprocal transplantation experiment of salt marsh sediments Targeted loci
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9kMariana and Kermadec Trench sediment 16S rRNA gene sequencing
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8kHeterogeneity of methane seep microbiomes in the NE Pacific
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8kMarine methane seep Targeted Locus (Loci)
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8kQueensland Marine Sediment
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8kUS East Coast Salt Marshes Targeted Locus (Loci)
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7kIt was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.
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7kBiological rejuvenation of iron oxides in bioturbated marine sediments
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7kComparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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7kBacterial Biogeography of Coastal Water in the Northern East China Sea
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7kImpact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea
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6kMarine Sediment from the Berkeley Bay Targeted Locus (Loci)
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6kSeasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean
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6kBacterial Diversity in the East China Sea
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6kNutrient addition mesocosm experiment Targeted Locus (Loci)
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5kSea spray aerosols at Three California Beaches
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5kMicrobial diversity in the Tongyeong-Geoje coastal area of Korea2
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5kADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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5kAbundance, diversity and distribution of Legionellales in wet environments in Sweden
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5kSoil microbial response to organic disturbances
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4kMarine metagenome Targeted loci environmental
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4kmarine sediment metagenome Targeted loci environmental
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4kPo river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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4kRed Sea microbial plankton Raw sequence reads
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4kTemporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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4kMicrobial diversity in the Tongyeong-Geoje coastal area of Korea
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4kADDOMEx
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4kBacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia
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4kEffects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem
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4kMicrobial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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3kVariations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea
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3kNorth Pacific Subtropical Gyre Microbial Community
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3kMediterranean Contaminated Pelagic communities
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3kMeta_Kosmos
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3kEffect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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3kMicrobial community in marine sediments
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3kCaspian Sea Sediment - 16S Survey Targeted Locus (Loci)
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3k16S data describing Antarctic benthic sediment
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3kAbyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental
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3keDNA_Subseafloor
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3kNuunat- ORMS formation during oil biodegradation at low temperature
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3kMicrobial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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2k16S_Sediment_Bolinao
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2kThis workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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2kMicrobial biogeography of French caves
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2kMicrobial Processes and Biodiversity: OCEAN
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2kSpirulina necromass degradartion in arctic marine sediments
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2kLife in a toxic environment
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2kNorthern Gulf of Mexico Hypoxic Zone Raw sequence reads
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2kIntertidal Mixing Zone Targeted Locus (Loci)
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2kDiversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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2kGulf of Mexico open ocean Targeted Locus (Loci)
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2kIncubation of marine methane seep sediments with a bioorthogonal amino acid
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2kBacterial 16S rRNA gene sequencing of Antarctic soil
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2kBaltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci)
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2kMicrobiome profiling Schlöppnerbrunnen peat cores from different depths
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2kOceanic microplankton do not adhere to the latitudinal diversity gradient
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2kaquatic bacterial metagenome Raw sequence reads
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2kSanta Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis
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2kExtracellular DNA marine sediment Targeted Locus (Loci)
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2kPelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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2k16S amplicons Subtropical Frontal Zone New Zealand
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2kCommunity structure of Archaea in the western North Pacific and the Arctic Ocean
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2kDiversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan
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2kmarine sediment metagenome Raw sequence reads
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2kMicrobial diversity in the Tongyeong-Geoje coastal area of Korea
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2kTaxonomic study of endospores in a marine sediment
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2kIMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER
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2kBaselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015
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2kProtist Diversity in the East China Sea
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2kMarine Water Column Samples Targeted loci environmental
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2kPatagonian fjord prokaryote community
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1kMarine bacteria metagenome
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1kmarine metagenome Raw sequence reads
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1kHydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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1kCCA_pathobiome
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1kmarine sediment metagenome Raw sequence reads
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1kComparison of marine sediments from the Beguela upwelling zone
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1kGroundwater microbiome
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1kCoastal seawater influenced by the municipal effluents Raw sequence reads
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1kthe assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays
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1kA practical introduction to microbial molecular ecology through the use of iChips
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1kCalifornia Current Cruise CCE-P1408 Process Cruise #6
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1kMarine sediment Raw sequence reads
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1kresuscitation mechanisms during enrichment culture
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1kThermophilic endospores in temperate sediments
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1kSediment bacteria in the Southern Ocean
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1kLimited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters
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1kPelagic Gulf of Mexico Targeted loci environmental
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1kWater and Sediment samples Targeted loci environmental
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1kA long-standing complex tropical dipole shapes marine microbial biogeography
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1kZooplankton communities in the coastal water of northeastern Hokkaido
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1kArctic Ocean
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1kphotoautotrophic_biofilm
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1kDiversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay
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1kEquatorial Pacific Ocean Targeted loci environmental
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1kINVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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1kCascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean
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1kmarine sediment metagenome Targeted loci environmental
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1kShotgun metagenomic analysis of Lake Paajarvi sediment microbes.
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1kGulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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1kStandard filtration practices significantly distort planktonic microbial diversity estimates
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1kBaltic Sea
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1kSouthern Ocean microorganisms Targeted Locus (Loci)
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1kCARBOM cruise 2013 flow cytometry sorted phytoplankton
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1kBacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan)
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1kEffect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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1kAmplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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1kBacteria in domestic water-storage containers with or without mosquito larvae
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1kmarine sediment metagenome Metagenome
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1kDiversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)
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1kStudies of marine microbial dark matter
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1kDark ocean microbial diversity
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1kSea water sample Targeted Locus (Loci)
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1kDiet analysis of Japanese sardine and Pacific round herring larvae
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1kMiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments
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1kMarine methane seep Targeted Locus (Loci)
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1k16S rRNA amplicon from marine Bacteria Raw sequence reads
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1kMetagenomic investigation of six depths from the anchialine Bundera sinkhole
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1kSouth China Sea interfaces 16S amplicon sequencing
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1kArctic first-year drift ice and under-ice water bacterial communities
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1kMicrobial associations in temperate marine copepods from the Gulf of Maine
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1kMicrobial communities in marine surface water
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1kDistribution of the Roseobacter clade
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986Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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982Yarwun Port Curtis Sediment Bacterial 16S rRNA (V6) 454 sequence
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972Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy)
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884Coral or reef-seawater associated bacteria Targeted Locus (Loci)
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884Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea
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874Xylophaga in situ Eclusion Experiment
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851Municipal Pensacola Beach Sand Metagenome
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850Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes
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817Transplant and re-transplant microcosms of Baltic Proper and Bothnian Sea bacterioplankton Targeted Locus (Loci)
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803Green Edge microcosms Raw sequence reads
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792water Raw sequence reads
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746peptide incubation in GOM C6 seawater bacteria Metagenome
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744DDCA-metagenome
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737Aarhus Bay sediment PCR amplified product sequencing
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736Mediterranean mud volcano flow Targeted loci
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700Seawater Targeted Locus (Loci)
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684Dissolved compounds excreted by copepods reshape the diversity and the activity of marine bacterioplankton community
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67216S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper
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662Marine sediment metagenome raw sequence reads
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629Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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622archaeal community in Haima cold seep in SCS
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609Marine bacteria Targeted Locus (Loci)
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597Trichodesmium spiralis associated microbiome Targeted loci
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597Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin)
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594Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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588Global Malaspina 2010 deep ocean expedition - rRNA pyrotags
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58615N methylamine SIP (WCO station L4)
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586Red Sea Zooplankton Raw sequence reads
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573Diet analysis of Pacific Bluefin Tuna larvae
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571Atlantic salmon microbiota
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569Uncultured eukaryotes Targeted Locus (Loci)
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569Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools
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568E1 Targeted Locus (Loci)
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562Prokaryotic community response to microalgal lysates
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553Bacterial diversity in the South Adriatic Sea during winter of 2016
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540marine sediment metagenome Raw sequence reads
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527SAR amplicon from community incubated with various nanophytoplankton in microcosm
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524Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea
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508Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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50716S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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484Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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476Microbial communities associated with ferromanganese nodules and the surrounding sediments
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472Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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446Microbial eukaryotes
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445Whale fall
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435Sea water microorganisms Raw sequence reads
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431Diversity and abundance of Bathyarchaeota (MCG) in South China Sea sediments and the implication of its ecological roles
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425marine metagenome Targeted Locus (Loci)
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422Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans
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417Nitrate-storing microorganisms in sediments of the Bornholm Basin
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415dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment
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403CTD water column metabarcoding
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401Sediment Metagenome
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383Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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369White sea picoplankton Metagenome
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365AllDist Targeted Locus (Loci)
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362Archaea
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354Microcosms Metagenome
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352Mesocosm Targeted Locus (Loci)
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345A study on microbial functional groups producing a climate related gas in the ocean
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339Marine Metagenome
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327Diversity, Ecology and Biogeochemistry of cyst-forming acantharia (Radiolaria) in the oceans
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319Marine metagenome ICM_JRV
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318Marine subseafloor sediment Targeted Locus (Loci)
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311Amundsen Gulf Overwintering Eukaryote Community
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304suspended particulate matter Raw sequence reads
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304uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads
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302Microbial diversity associated with copepods in the North Atlantic subtropical gyre
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301Seawater bacteria Metagenome
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30016S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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300Southern Ocean
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294VAG Mine Pit Pond Metagenome
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291Diversity and composition of sediment microbial assemblages in an Atlantic port environment
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283Marine metagenome ICM_GPS
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283Comparison of copper contaminated soils, with similar uncontaminated controls.
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276Coastal eutrophication controls the bacterial community composition in different reef habitats of the Spermonde Archipelago, Indonesia.
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273envinronment Metagenome
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272Vibrio-specific 16S rRNA sequences from seawater, sediment, and oyster hatchery samples
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268BrdU_MAB_SS Metagenome
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262Metagenomic community analysis of marine zooplankton using two plankton nets
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258Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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239Distinctive community structure and high diversity in particle-associated prokaryotes in tropical and subtropical Pacific Ocean surface seawater
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236gas hydrate bearing sediment Raw sequence reads
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235Ocean Acidification baceria sample Targeted loci environmental
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2213Soil16S
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219Microbial diversity of marine sediments from Ross Sea
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218Blue Mountains Swamp Archaea
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217marine sediment metagenome Raw sequence reads
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213uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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203Hydrothermal Deposit Targeted Locus (Loci)
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200Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia
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188Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon
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184Microbial diversity studies of Arabian Sea sediment
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182rDNA amplicon sequencing of Western North Atlantic microbial community
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179Ocean Water Metagenome
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177Research on Airborne Ice Nucleating Species
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175Environmental zooplankton Targeted Locus (Loci)
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174Deep mud-volcano biosphere in the Nankai accretionary wedge
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173Global Ocean Sampling Expedition
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169sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads
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155Ocean sediment-basement interface Targeted Locus (Loci)
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152Surface ocean Targeted Locus (Loci)
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151ocean bacteria Metagenomic assembly
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146Ocean crust Targeted Locus (Loci)
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143A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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141marine Archaea metagenome
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141blocking PCR amplification of metazoan DNA for protistan diversity
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140Magdalen Island Spatio Temporal (MIST) Raw sequence reads
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130Sediment Microcosm Metagenome
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129Metagenome analysis of picoeukaryotes from surface seawater
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126Microbial Diversity in Antarctic marine sediments (Admiralty Bay and Bransfield Strait)
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11916S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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115UK coast natural seawater Genome sequencing
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114Anammox bacteria in sediment cores of Daya Bay, China
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108Marine planktonic ciliates: SSU rDNA
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104Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.
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97Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads
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90Habitat and host related variation in sponge bacterial communities in Indonesian coral reefs and marine lakes
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83Metagenomic sequence from soil bacteria
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82De novo whole metagenome sequencing studies
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78uncultured marine eukaryote Targeted loci environmental
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72Archaea diversity in marine sediment
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70Marine metagenome ICM_LCR
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58Marine sediment metagenome ICM_GMS
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55SCS SEATS Raw sequence reads
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51Hatteras return: Oligotrich and choreotrich ciliates diversity at small scales
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49Anammox bacteria in surface sediments of South China Sea
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48Porcupine Seabight 16S Ribosomal RNA
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45Microbial induced mineral precipitations caused by nitrate treatment for souring control during microbial enhanced oil recovery (MEOR)
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43Metabolically active microbial communities in marine sediment under high-CO2 and low-pH extremes
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42Marine sediment metagenome ICM_FIS
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40Archaea Arctic Ocean Survey Targeted Locus (Loci)
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35Preservation of ancient eukaryotic DNA in methane hydrate-associated marine sediments.
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33Marine metagenome ICM_AWP
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26Protists tag sequencing of 18S rRNA HV 9
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25Mount Hope Bay bacteria Targeted Locus (Loci)
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22Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)
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18Diesel contamination of Antarctic soils and sediments
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14nifH diversity in the North Pacific Ocean
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11Diversity and structure of benthic bacterial community from South-Eastern Pacific Ocean, Targeted Locus (Loci)
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11Marine metagenome ICM_VAG
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7Seawater Metagenome
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3Marine sediment metagenome ICM_NZS
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2Accuracy of protist diversity assessments: morphology compared to cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study
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2Lane 6 Analysis