Genus Allium in CSBG SB RAS herbarium collections (NS,NSK)
Citation
Kovtonyuk N, Han I, Gatilova E, Friesen N (2021). Genus Allium in CSBG SB RAS herbarium collections (NS,NSK). Version 1.7. Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/e4hv2e accessed via GBIF.org on 2024-12-04.Description
Genera Allium and Caloscordum in herbarium collections (NS, NSK) of the Central Siberian Botanical Garden have 6224 sheets, most of them were examined by N. Friesen
Digitization of herbarium specimens was initially undertaken for type specimens with a customized HerbScan unit, which consisted of a flatbed scanner (Epson Expression 10000XL) modified for inverted use. Images and metadata for 22 Allium type specimens preserved at the NSK are currently available on the Virtual Herbaria web site at the University of Vienna, Austria (http://herbarium.univie.ac.at/database) and 12 of them in JSTOR (https://plants.jstor.org).
Purpose
In 2017 a new research group Unique Scientific Unit – Herbarium (USU-Herbarium) was organized in the CSBG SB RAS for the digitization and management of herbarium collections NS and NSK.
Sampling Description
Study Extent
Genera Allium and Caloscordum in the herbarium collections (NS, NSK) of the Central Siberian Botanical Garden have 6224 sheets. They were gathered from Asia, Europe and North America.Sampling
All of them are digitized using three customized scanners: Herbscan and two ObjectScan 1600, according to the international standards, at 600 dpi, with a barcode, 24-color scale and spatial scale bar. Images and metadata are stored in the CSBG Database generated by ScanWizard Botany and MiVapp Botany software (Microtek, Taiwan).Method steps
- Images and metadata are stored in the CSBG SB RAS Digital herbarium (http://herb.csbg.nsc.ru:8081) generated by ScanWizard Botany and MiVapp Botany software (Microtek, Taiwan).
Additional info
Originally, only 12,8% of labels had collection point coordinates when digitizing samples. Irina Han was specially engaged in search of coordinates using different resources on the Internet. These coordinates are entered in the Digital Herbarium by Evgeniya Gatilova. Now we have more than 85% of samples with coordinates and maps of areas can be viewed at gbif.org.Taxonomic Coverages
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Alliumcommon name: Onion rank: genus
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Caloscordumrank: genus
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Amaryllidaceaerank: family
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Alliumrank: subgenus
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Ameralliumrank: subgenus
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Anguinum
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Butomissarank: subgenus
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Ceparank: subgenus
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Melanocrommyumrank: subgenus
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Microscordumrank: subgenus
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Nectaroscordumrank: subgenus
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Polyprasonrank: subgenus
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Porphyroprasonrank: subgenus
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Reticulatobulbosarank: subgenus
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Rhizirideumrank: subgenus
Geographic Coverages
Bibliographic Citations
- Kovtonyuk N.K., Barkalov V. Yu., Friesen N.V. (2009). Synopsis of the family Alliaceae Borkh. (Onions) of Asian part of Russia // Turczaninowia. Vol.12 . N 3–4. P. 31–39. - http://old.ssbg.asu.ru/turcz/turcz3_4_09_31_39.pdf
- Kovtonyuk N.K. 2015. Virtual collection of type specimens in M.G. Popov Herbarium (NSK) // Rastitel’niy mir Asiatskoy Rossii, 3: 88-93. - http://www.izdatgeo.ru/pdf/rast/2015-3/88.pdf
- Kovtonyuk N.K. 2017. Virtual herbarium collections as a resource for taxonomy and biodiversity study // Rastitel’niy mir Asiatskoy Rossii, 1: 98-104. - DOI: 10.21782/RMAR1995-2449-2017-1(98-104)
- Kovtonyuk N., Han I. and Gatilova E. 2018. Digitization of vascular plant herbarium collections at the Central Siberian Botanical Garden, Novosibirsk, Russia // Skvortsovia, 4 (3): 100 – 111. - http://skvortsovia.uran.ru/2018/4302.pdf
- Kovtonyuk N., Han I., Gatilova E. (2019) Digital Herbarium Collections of the Central Siberian Botanical Garden SB RAS, Novosibirsk, Russia. In: Bychkov I., Voronin V. (eds) Information Technologies in the Research of Biodiversity. Springer Proceedings in Earth and Environmental Sciences. Springer, Cham. – pp. 22–27. DOI: https://doi.org/10.1007/978-3-030-11720-7_4 - DOI: https://doi.org/10.1007/978-3-030-11720-7_4
- Kovtonyuk N, Han I, Ovchinnikova S, Nikiforova O, Vlasova N, Shekhovtsova I, Doron′kin V, Troshkina V, Pinzhenina E, Belyaeva I, Eremin I (2019). Typotheca of the higher vascular plants stored in M.G. Popov Herbarium (NSK) at the Central Siberian botanical garden SB RAS. Version 1.4. Central Siberian Botanical Garden SB RAS. Occurrence dataset https://doi.org/10.15468/qdfdqq accessed via GBIF.org on 2019-08-07. - https://doi.org/10.15468/qdfdqq accessed via GBIF.org on 2019-08-07
- S.A. James, P.S. Soltis, L. Belbin, A.D. Chapman, G. Nelson, D.L. Paul, M. Collins, Herbarium data: global biodiversity and societal botanical needs for novel research, Appl. Plant Sci. 6(2), e1024 (2018). - https://doi.org/10.1002/aps3.1024
- B.M. Thiers, The World’s Herbaria 2019: A Summary Report Based on Data from Index Herbariorum, Issue 3.0, published January 10, 2020. - http://sweetgum.nybg.org/science/docs/The_Worlds_Herbaria_2019.pdf
- N.K. Kovtonyuk, I.V. Han, E.A. Gatilova, Family Primulaceae in digital Herbarium of the Central Siberian Botanical garden SB RAS, Rast. Mir Asian Russia, 4 (2018). - https://doi.org/10.21782/RMAR1995-2449-2018-4(19-29)
- N. Kovtonyuk, I. Han, E. Gatilova, V. Troshkina, Family Geraniaceae in CSBG SB RAS herbarium collections (NS, NSK). Version 1.1. Central Siberian Botanical Garden SB RAS. (2020). - https://doi.org/10.15468/sunx5n
- N. Friesen, S. Smirnov, T.Herden, B. Oyuntsetseg, A. Shmakov, H.Hurka, Allium species of section Rhizomatosa, early members of the Central Asian steppe vegetation, Flora - Morphology Distribution Functional Ecology of Plants 263, 151536 (2020). - DOI: 10.1016/j.flora.2019.151536
- S. Smirnov, M. Skaptsov, A. Schmakov, R. Fritsch, N. Friesen, Spontaneous hybridization among Allium tulipifolium and A. robustum (Allium subg. Melanocrommyum, Amaryllidaceae) under cultivation, Phytotaxa 303, 2 (2017). - http://dx.doi.org/10.11646/phytotaxa.303.2.5
- N. Kovtonyuk, V. Barkalov, N. Friesen, Family Alliaceae Borkh., Konspekt Flory Aziatskoi Rossii: Sosudistye Rasteniia (Synopsis of flora of Asiatic Russia: vascular plants) (2012). -
- Y. Roskov, G. Ower, T. Orrell, D. Nicolson, N. Bailly, P. Kirk, T. Bourgoin, R. DeWalt, W. Decock, E. Nieukerken, J. Zarucchi, L. Penev, eds., Species 2000 & ITIS Catalogue of Life, 25th March 2019, Digital resource at www.catalogueoflife.org/col. Species 2000: Naturalis, Leiden, the Netherlands (2020). ISSN 2405-8858 - www.catalogueoflife.org/col
- T.A. Sinitsyna, Genus Allium L. (Alliaceae) in Siberia, Vavilovia 2 (2019). - https://doi: 10.30901/2658-3860-2019-3-3-22
Contacts
Nataliya Kovtonyukoriginator
position: Senior Researcher
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
RU
Telephone: +79529365495
email: knat2008@yandex.ru
homepage: https://csbg-nsk.ru/kovtonyuk_nk
userId: http://orcid.org/0000-0002-4018-6634
Irina Han
originator
position: main engineer
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
RU
email: irahan81@gmail.com
homepage: http://csbg-nsk.ru/unu_herbarium
userId: http://orcid.org/0000-0001-8385-5247
Evgeniya Gatilova
originator
position: main specialist
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
RU
email: zhenya_kl@mail.ru
homepage: http://csbg-nsk.ru/unu_herbarium
userId: http://orcid.org/0000-0001-9478-0244
Nikolai Friesen
originator
position: Privat Dozent Dr. habil.
Universität Osnabrück, Botanical Garden
Osnabrück
DE
email: nfriesen@uni-osnabrueck.de
homepage: https://www.researchgate.net/profile/Nikolai_Friesen
userId: http://orcid.org/0000-0003-3547-3257
Nataliya Kovtonyuk
metadata author
position: Senior Researcher
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
RU
Telephone: +79529365495
email: knat2008@yandex.ru
homepage: https://csbg-nsk.ru/kovtonyuk_nk
userId: http://orcid.org/0000-0002-4018-6634
Irina Han
metadata author
position: main engineer
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
email: irahan81@gmail.com
homepage: http://csbg-nsk.ru/unu_herbarium
userId: http://orcid.org/0000-0001-8385-5247
Nataliya Kovtonyuk
author
position: Senior Researcher
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
RU
Telephone: +79529365495
email: knat2008@yandex.ru
homepage: https://csbg-nsk.ru/kovtonyuk_nk
userId: http://orcid.org/0000-0002-4018-6634
Irina Han
programmer
position: main engineer
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
Telephone: +79529365495
email: irahan81@gmail.com
homepage: http://csbg-nsk.ru/unu_herbarium
userId: http://orcid.org/0000-0001-8385-5247
Evgeniya Gatilova
processor
position: main specialist
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
RU
email: zhenya_kl@mail.ru
homepage: http://csbg-nsk.ru/unu_herbarium
userId: http://orcid.org/0000-0001-9478-0244
Nikolai Friesen
principal investigator
position: Privat Dozent Dr. habil.
Universität Osnabrück, Botanical Garden
Osnabrück
DE
email: nfriesen@uni-osnabrueck.de
homepage: https://www.researchgate.net/profile/Nikolai_Friesen
userId: http://orcid.org/0000-0003-3547-3257
Nataliya Kovtonyuk
administrative point of contact
position: Senior Researcher
Central Siberian Botanical Garden, SB RAS
Zolotodolinskaya St. 101
Novosibirsk
630090
Novosibirskaya oblast'
RU
Telephone: +79529365495
email: knat2008@yandex.ru
homepage: https://csbg-nsk.ru/kovtonyuk_nk
userId: http://orcid.org/0000-0002-4018-6634