Environmental eukaryotes Metagenome
Citation
MGnify (2019). Environmental eukaryotes Metagenome. Sampling event dataset https://doi.org/10.15468/rvslah accessed via GBIF.org on 2024-09-01.Description
18S sequences from environmental samples using universal eukaryote primers. The goal of the study is to design and test eukaryote specific primers to be used in assessing biodiversity of eukaryotes.Sampling Description
Sampling
18S sequences from environmental samples using universal eukaryote primers. The goal of the study is to design and test eukaryote specific primers to be used in assessing biodiversity of eukaryotes.Method steps
- Pipeline used: https://www.ebi.ac.uk/metagenomics/pipelines/4.1
Taxonomic Coverages
Geographic Coverages
Bibliographic Citations
- Lanzén A, Lekang K, Jonassen I, Thompson EM, Troedsson C. 2017. DNA extraction replicates improve diversity and compositional dissimilarity in metabarcoding of eukaryotes in marine sediments. PLoS One vol. 12 - DOI:10.1371/journal.pone.0179443
Contacts
originatorUniversity of Bergen
metadata author
University of Bergen
administrative point of contact
University of Bergen