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GBIF.org (14 January 2020) GBIF Occurrence Download https://doi.org/10.15468/dl.qmwfnr
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19kNMNH Extant Specimen Records
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19kCollections of Phytoplankton at Herbarium Berolinense, Berlin (B)
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8kMarine metagenomes Metagenome
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2kGrethe Hasle Diatom Collection
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2kNahant Collection
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2kAmplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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1kMICROBIS database
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1kPhytoplankton from the White Sea, Barents Sea, Norwegian Sea and Arctic Basin 1993-2003
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1kArctic Ocean Diversity
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755Artportalen (Swedish Species Observation System)
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632Benthos, zoo- and phytoplancton data collected during the monitoring cruise of RV "Vladimir Parshin" in 1996.
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523EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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521UPCB - Herbário do Departamento de Botânica
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335Nutrient addition mesocosm experiment Targeted Locus (Loci)
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281SOLA Raw sequence reads
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270Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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241Sediment Metagenome Raw sequence reads
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227“Phytoplankton and Zooplankton data collected during the Black Sea cruises of UkrSCES R/V "Georgyi Ushakov" in 1992”
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216Marine Water Column Samples Targeted loci environmental
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198Zooplankton communities in the coastal water of northeastern Hokkaido
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18416S Amplicon Data from an Antarctic Cold Seep
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168Macroalgal Morphology affects composition and settlement of microbial communities
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164Red Sea microbial plankton Raw sequence reads
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162Marine invertebrate collection NTNU University Museum
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147Protist Diversity in the East China Sea
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131marine sediment metagenome Metagenome
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130California Current Cruise CCE-P1408 Process Cruise #6
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126Diet analysis of Japanese sardine and Pacific round herring larvae
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123Extracellular DNA marine sediment Targeted Locus (Loci)
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121Protists community in the southern East China Sea
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117Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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115Exploring Fronts With Multiple Robots – Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
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114CARBOM cruise 2013 flow cytometry sorted phytoplankton
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112Red Sea Zooplankton Raw sequence reads
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106Water and Sediment samples Targeted loci environmental
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96Uncultured eukaryotes Targeted Locus (Loci)
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92Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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92INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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91Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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89Paleobiology Database
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83River Macrophytes Database
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81ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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79North Sea plastic incubation and reference communities, raw sequence reads
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76sediment metagenome Raw sequence reads
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75Arctic microbiome along Svalbard Cross Shelf transects
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74Polymetallic nodule field Targeted loci environmental
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72Amundsen Gulf Overwintering Eukaryote Community
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72Microbial communities in the ocean Raw sequence reads
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67Environmental zooplankton Targeted Locus (Loci)
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66ARMS Jeddah sample Raw sequence reads
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64Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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63Biological rejuvenation of iron oxides in bioturbated marine sediments
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62Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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59Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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59Coral
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5816S rDNA amplicon of Bacteria and Archaea Metagenome
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58Nitrate-storing microorganisms in sediments of the Bornholm Basin
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57Southern Ocean microorganisms Targeted Locus (Loci)
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56SAR amplicon from community incubated with various nanophytoplankton in microcosm
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56“Phytoplankton and Zooplankton data collected during the Black Sea cruises of UkrSCES R/V "Ernst Krenkel" in 1992”
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54ECOPOT_2: Phytoplankton in Flemish waterbodies
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53Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene
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53Bernice P. Bishop Museum
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52Metagenomic community analysis of marine zooplankton using two plankton nets
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52Sea spray aerosols at Three California Beaches
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50Metagenome analysis of picoeukaryotes from surface seawater
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48Diet analysis of Pacific Bluefin Tuna larvae
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47Microbial Processes and Biodiversity: OCEAN
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46Microbial eukaryotes
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44Marine sediment metagenome raw sequence reads
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43Little Sippewissett Marsh Targeted Locus (Loci)
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40Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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37Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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36Microbial communities in the phycosphere environment
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35Community structure of Archaea in the western North Pacific and the Arctic Ocean
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34Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site
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34marine metagenome Raw sequence reads
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34Surface ocean Targeted Locus (Loci)
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34A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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33White sea picoplankton Metagenome
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33Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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33Whale fall
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32Sea ice and seawater Raw sequence reads
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32Marine metagenome ICM_JRV
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31Lund Botanical Museum (LD)
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29sediment metagenome Raw sequence reads
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29Marine metagenome ICM_GPS
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28uncultured marine eukaryote Targeted loci environmental
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28uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads
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26uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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26Bacteria community in the southern East China Sea
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25Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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23Marine eukaryotes Targeted loci environmental
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23Sediment of acid mine drainage Targeted loci environmental
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23Magdalen Island Spatio Temporal (MIST) Raw sequence reads
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2216S data describing Antarctic benthic sediment
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20Fungal diversity in Sanya mangrove sediments, China
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19Queensland Marine Sediment
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19Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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19blocking PCR amplification of metazoan DNA for protistan diversity
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18Heterogeneity of methane seep microbiomes in the NE Pacific
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18Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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17Sediment Microcosm Metagenome
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17marine metagenome Raw sequence reads
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17Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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17Oxygen minimal zone Targeted loci environmental
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17Diversity of Microbial Eukaryotes in Sea Waters From Fildes Peninsula,King George Island, Antarctica
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17Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion
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17Marine metagenome ICM_WBS
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17Soil metagenome from healthy and unhealthy agricultural soil
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17Protists in Havre-aux-Maisons Lagoon, Magdalen Islands, Quebec, Canada
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17Equatorial Pacific Ocean Targeted loci environmental
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16Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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15Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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15The Indigo Project: a global citizen science Ocean survey
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15Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins
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14Seawater metagenome Targeted loci environmental
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14Municipal Pensacola Beach Sand Metagenome
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13Gulf of Mexico open ocean Targeted Locus (Loci)
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1316S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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13Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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13Magadalen Islands Spatio Temporal (MIST) Large Fraction
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12Green Edge microcosms Raw sequence reads
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12Metagenomic investigation of six depths from the anchialine Bundera sinkhole
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12Marine sediment metagenome ICM_DSE
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12Marine protists Metagenome
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11Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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11Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
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11Eukaryotic protists Metagenome
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10Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)
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10Microbial eukaryote Metagenome
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10Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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10Coastal Marine Environment Targeted loci environmental
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10Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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10Protists tag sequencing of 18S rRNA HV 9
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9Saltern of Margherita di Savoia Metagenome
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9ADDOMEx
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9Global Ocean Sampling Expedition
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9Geographically tagged INSDC sequences
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9Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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9Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.
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8seawater metagenome Metagenome
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8uncultured eukaryote Raw sequence reads
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8Amplicon-Based Illumina Sequencing Reveals High Diversity of Phytoplankton in the Coastal Waters of Qinhuangdao
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8Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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8Marine fungi Raw sequence reads
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7The Nanoeukaryotic plankton Raw sequence reads
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7Phaeobacter inhibens host-attached and free-living communities
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7sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads
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7VAG Mine Pit Pond Metagenome
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7Natural History Museum (London) Collection Specimens
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7Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.
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7Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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7Botany (UPS)
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6Marine sediment microbial communities in the presence of macrophytes
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6Microbial Community Diversity Response to a Changing Arctic Ocean
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6Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea
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6Microbial community diversity in Arctic marine sediments and Planktonic microbial
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6Indian_sediments
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6Microbial community structure of chronically polluted marine sediments from a cold region of the southern hemisphere
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6ARK26/3_Station212 Targeted Locus (Loci)
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6Microbial communities in estuarine sediments
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6Marine sample from an Antarctic Bay Raw sequence reads
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6Environmental eukaryotes Metagenome
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6Metazoan sequencing
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5Tucurui_Metagenoma_MGRAST
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5Temperature shifts simulating secondary oil recovery
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5Spirulina necromass degradartion in arctic marine sediments
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5Protistan plankton diversity along salt gradient
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5Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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4Marine metagenome ICM_LCR
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4Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing
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4Preservation of ancient eukaryotic DNA in methane hydrate-associated marine sediments.
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4envinronment Metagenome
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4Microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard.
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4Microbial communities associated with Juncus roemerianus and Spartina alterniflora vegetated sediments in Louisiana saltmarshes
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4Microbial eukaryotes present in a Norwegian coastal ecosystem and in the gut content of Calanus copepods from Raunefjorden
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4sediment metagenome Metagenome
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4sediment metagenome Metagenome
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4uncultured prokaryote Targeted loci environmental
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4Microbial ecology of archaeal community in sediment from adjacent waters of Rushan Bay
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4microbial diversity Raw sequence reads
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4Peruvian eddy shotgun metagenomes
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4marine metagenome Targeted Locus (Loci)
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4Microbial eukaryote 454 Roche sequencing in estuarine ecosystems
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4Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 sequencing-by-synthesis
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4Metagenomics of Brava and Tebenquiche lakes microbial mats
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4microbial community diversities of Tuosu Lake
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4Arctic benthos Targeted Locus (Loci)
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3Active microbial eukaryotes amidst a marine subsurface RNA paleome
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3Comparison of marine sediments from the Beguela upwelling zone
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3Meiobenthos nSSU metagenetic meiobenthic data
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3Saltern microbial community diversity
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3Microbial biogeography of French caves
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3Global phylogeography survey of thermophilic spores in marine sediments.
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3marine metagenome Raw sequence reads
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3Plankton sample collected from Nanaimo Harbour Targeted Locus (Loci)
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3Diversity and population structure of Marine Group A in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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3Marine Sediment from the Berkeley Bay Targeted Locus (Loci)
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3Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing
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3De novo whole metagenome sequencing studies
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3Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.
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3A long-standing complex tropical dipole shapes marine microbial biogeography
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3Sundarbans estuarine ecosystem Metagenome
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3Suffolk Biodiversity Information Service (SBIS) Dataset
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3Nuunat- ORMS formation during oil biodegradation at low temperature
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3Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi
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3Microbial eukaryotes Metagenome
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2Ocean sediment-basement interface Targeted Locus (Loci)
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2Marine metagenome ICM_AWP
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2water sample Raw sequence reads
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2Composición del fitoplancton de la Isla Cayo Serranilla durante la Expedición Seaflower 2017 - Proyecto Colombia BIO
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2ocean bacteria Metagenomic assembly
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2ETNP Targeted Locus (Loci)
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2Microbial eukaryote community structure during early phytoplankton blooms in the naturally iron-fertilized Kerguelen area (Southern Ocean) Targeted Locus (Loci)
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2rDNA amplicon sequencing of Western North Atlantic microbial community
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2Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean
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2Marine metagenome ICM_DOF
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2NEW-1
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2Microbiome profiling Schlöppnerbrunnen peat cores from different depths
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2DSW-2
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2Marine subseafloor sediment Targeted Locus (Loci)
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2Swan lake bacteria Raw sequence reads
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2SCHEMA_Sediment
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2Arctic sea-ice and sub-ice seawater raw sequence reads
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2Marine phytoplankton Metagenome
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2Assessing the microbial diversity in Cape Comorin ocean water
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2Diatom Community Composition CCS Diel
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2Uncultured marine eukaryotes Targeted Locus (Loci)
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2marine metagenome Metagenome
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2Arctic Ocean
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2Canada Basin Metagenome
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2Fringing reef Metagenome
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2NEW-2
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2California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental
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2Eukaryote diversity assessment of sediments of the Western English Channel
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2USS-2
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2University of California Santa Barbara Algae Collection
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2Natural Resources Wales Regional Data : Mid-Wales
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2Archaea 16S 01-13 Genome sequencing and assembly
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2Marine sediment Raw sequence reads
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2marine sediment Raw sequence reads
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2Marine microbial eukaryote community analysis in Korea
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2Life in a toxic environment
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2Marine sediment metagenome ICM_FIS
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2Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)
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2Depth dependent (0-5,000 m) and seasonal variability in archaeal community structure in the subarctic and subtropical western North Pacific.
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2Arabian sea sediment samples with protist reads Metagenome
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216s data marine community of L4 station
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218S-V4 amplification of dinoflagellate cyst communities in the South China Sea
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2marine sediment metagenome Targeted Locus (Loci)
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2Uncultured eukaryote community Targeted loci environmental
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1Thermophilic endospores in temperate sediments
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1DOW-2
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1Coral metagenome ICM_CCB
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1DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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1Metagenome microbial communities of bottom sediments of the Kara Sea
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1marine plankton metagenome Raw sequence reads
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1Socompa Lake Stromatolite Shotgun Metagenomic Sequencing
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1Ascidian and Seawater Metagenome
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1deep marine subsurface Raw sequence reads
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1Ocean crust Targeted Locus (Loci)
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1Svalbard Targeted Locus (Loci)
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1Effects of triclosan on bacterial community composition in natural seawater microcosms
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1Duke University Herbarium Algae Collection
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1Microbial community in marine sediments
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1Antarctic Hypersaline Brine Raw sequence reads
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1Comparative metagenome analysis of normal and arsenic contaminated soils from ballia district, Uttar Pradesh, India
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1Microbial diversity of Oslo Fjord Pockmark sediments
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1Active picoeukaryotes in the Eastern Mediterranean Sea
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1Diversity, Ecology and Biogeochemistry of cyst-forming acantharia (Radiolaria) in the oceans
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1Foraminifera 18S rDNA and rRNA diversity for fish farms biomonitoring
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1Microbial diversity in the Tongyeong-Geoje coastal area of Korea2
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1Lake sediment sequencing
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1Marine methane seep Targeted Locus (Loci)
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1marine sediment metagenome Raw sequence reads
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1Marine sediment metagenome ICM_CFU
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1This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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1rRNA, rDNA bacteria thaw ponds Targeted loci environmental
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1Nanticoke Harbour, ON, Canada (plankton SSU 454 sequencing)
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1Uncultered bacterium Targeted Locus (Loci)
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1Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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1Survey and monitoring records for Scottish Wildlife Trust reserves from reserve convenors and Trust volunteers - Unassessed data
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1DOS-1
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1Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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1Marine sediment metagenome ICM_CRS
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1Environmental Foraminifera Raw sequence reads
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1Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads
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1Characteristics of bacterial communities in the deep sediment Lake Baikal from the regions with oil and gases discharging
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1Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy)
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1Marine sediment metagenome
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1Bacteria Metagenome
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1How much do we know about marine metazoan biodiversity? Recent disclosures using second generation sequencing.
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1Norwegian Species Observation Service
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1Taxonomic composition of microbial communities in coastal Arctic sediments
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1Marine metagenome ICM_ABR
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1Prince Edward Island marine metgenome Raw sequence reads
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1Sediment microbial community Random survey
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1Benthic Ocean Acidification
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1Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC
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1Prokaryotic community response to microalgal lysates
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11)sediments; 2) coral floc Metagenome
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1soil bacteria and fungi Targeted loci environmental
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1Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon
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1Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing
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1marine sediment metagenome Raw sequence reads
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1Narragansett Bay, RI Sediments Targeted Locus (Loci)
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1Marine bacterial, archaeal and eukaryotic diversity and community structure on the continental shelf of the Western Antarctic Peninsula
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116S rRNA Analysis of Osaka Bay Microbiomes