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14kMarine metagenomes Metagenome
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7kNahant Collection
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4kZostera Marina Ammonification environmental
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3kMICROBIS database
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2kCoral
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1kEffects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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1kEMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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1kDevelopment and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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1kSCHEMA_Sediment
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1k16S Amplicon Data from an Antarctic Cold Seep
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957Little Sippewissett Marsh Targeted Locus (Loci)
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916Bacteria exposure experiment North Sea
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884marine sediment metagenome Targeted loci environmental
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875Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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872Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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859Reciprocal transplantation experiment of salt marsh sediments Targeted loci
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851Marine methane seep Targeted Locus (Loci)
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851Sediment surface microbial community changes due to phytoplankton addition
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805Heterogeneity of methane seep microbiomes in the NE Pacific
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787Microbial community structure is affected by cropping sequences and bio-covers under long-term no-tillage
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704Marine Sediment from the Berkeley Bay Targeted Locus (Loci)
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649Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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636US East Coast Salt Marshes Targeted Locus (Loci)
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625Biological Impacts of Ocean Acidification
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613Polymetallic nodule field Targeted loci environmental
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600DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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542Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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521Biological rejuvenation of iron oxides in bioturbated marine sediments
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510Seasonal and spatial diversity of bacterial communities in marine sediments of Ningbo Xiangshan Coastal Ocean
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475Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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463Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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448Queensland Marine Sediment
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386marine sediment metagenome Metagenome
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346Bacterias y Arqueas de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO
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324Macroalgal Morphology affects composition and settlement of microbial communities
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318Comparative 16S analysis of hydrothermal vent samples from the Mid-Atlantic Ridge (MAR)
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30516S_Sediment_Bolinao
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304Spirulina necromass degradartion in arctic marine sediments
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287Sea spray aerosols at Three California Beaches
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286Po river Prodelta and Mar Piccolo of Taranto surface sediments bacterial communities targeted loci
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280Microbial community in marine sediments
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275Bacterial Biogeography of Coastal Water in the Northern East China Sea
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272Variations in prokaryotic community assembly and predicted metabolic potential of surface sediments with geography in the coastal northern Zhejiang, East China Sea
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263marine sediment metagenome Targeted loci environmental
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253eDNA_Subseafloor
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249Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea
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247Microbial diversity in the Tongyeong-Geoje coastal area of Korea2
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231Microbiome profiling Schlöppnerbrunnen peat cores from different depths
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223IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER
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22216S data describing Antarctic benthic sediment
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220Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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214Sediment bacteria in the Southern Ocean
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212Microbial Biogeography and Potential Ecological Function Deep Indian Ocean Ridge
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208Incubation of marine methane seep sediments with a bioorthogonal amino acid
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205Abyssal Baseline Study & Geophysical Survey (ABYSSLINE 02)_AB01_Re-sequenced Targeted loci environmental
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205Marine metagenome Targeted loci environmental
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204Caspian Sea Sediment - 16S Survey Targeted Locus (Loci)
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203Santa Monica Basin seep sediment incubations to assess C and N sources for F430 synthesis
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202Northern Gulf of Mexico Hypoxic Zone Raw sequence reads
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201Bacterial communitiy compositions on natural and artificial substrates in the Spermonde Archipelago, Indonesia
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199North Pacific Subtropical Gyre Microbial Community
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199It was verified the impact of irrigation treatments (wet, optimal, dry and very dry) and three potato cultivars on soil microbial community.
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189Mediterranean Contaminated Pelagic communities
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169Comparison of marine sediments from the Beguela upwelling zone
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161Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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160Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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157Life in a toxic environment
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151A practical introduction to microbial molecular ecology through the use of iChips
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151Intertidal Mixing Zone Targeted Locus (Loci)
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141resuscitation mechanisms during enrichment culture
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141Studies of marine microbial dark matter
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135Thermophilic endospores in temperate sediments
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127This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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126Effects of Fecal Input, Environmental Conditions, and Environmental Sources on Enterococci Concentrations in an Estuarine Ecosystem
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123Xylophaga in situ Eclusion Experiment
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120the assembly of abundant and rare bacterioplankton subcommunities in three subtropical bays
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113marine sediment metagenome Raw sequence reads
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112Marine methane seep Targeted Locus (Loci)
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111Coastal seawater influenced by the municipal effluents Raw sequence reads
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110Bacterial Diversity in the East China Sea
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108marine sediment metagenome Raw sequence reads
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107Marine bacteria metagenome
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102Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)
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100Aarhus Bay sediment PCR amplified product sequencing
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100aquatic bacterial metagenome Raw sequence reads
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99ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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98marine metagenome Raw sequence reads
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97Diversity of archaeal and bacterial 16S rRNA gene in marine sediment in Aarhus Bay
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97Soil microbial response to organic disturbances
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96Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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94Red Sea microbial plankton Raw sequence reads
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94Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy)
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92Groundwater microbiome
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89marine sediment metagenome Targeted loci environmental
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82Geographically tagged INSDC sequences
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81Meta_Kosmos
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78Taxonomic study of endospores in a marine sediment
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77MiSeq 16S rRNA gene (prokaryotic 16S rRNA gene) sequences of 16 SCS sediments
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77Fiocruz/CLEP - Coleção de Leptospira
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77DSMZ Prokarya Collection Catalogue
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77CCA_pathobiome
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75ADDOMEx
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75photoautotrophic_biofilm
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75Limited influence of primary treated sewage waters on bacterial abundance, production and community composition in coastal seawaters
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74Dark ocean microbial diversity
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74Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.
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70South China Sea interfaces 16S amplicon sequencing
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68Diversity of bacterioneuston and bacterioplankton in coastal waters of Misaki, Japan
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68Nuunat- ORMS formation during oil biodegradation at low temperature
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65Community structure of Archaea in the western North Pacific and the Arctic Ocean
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65Baltic Sea
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64Microbial biogeography of French caves
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64Nutrient addition mesocosm experiment Targeted Locus (Loci)
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64Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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63Oceanic microplankton do not adhere to the latitudinal diversity gradient
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63DSMZ Bacteria
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63Microbial Processes and Biodiversity: OCEAN
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62Distribution of the Roseobacter clade
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61Marine sediment Raw sequence reads
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60Pelagic Gulf of Mexico Targeted loci environmental
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58Microbial diversity in the Tongyeong-Geoje coastal area of Korea
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57marine sediment metagenome Metagenome
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57Equatorial Pacific Ocean Targeted loci environmental
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55Coral or reef-seawater associated bacteria Targeted Locus (Loci)
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51Baselines Initiative 16S rRNA gene dataset: Baselines Amplicon Release 1 (R1) Indian Ocean 2015
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51ATCC Bacteria Collection Catalog
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48Baltic Sea high-frequency temporal study 2012 at the Linnaeus Microbial Observatory Targeted Locus (Loci)
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47Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean
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47Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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4516S rRNA amplicon from marine Bacteria Raw sequence reads
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44Microcosms Metagenome
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44Distribution and composition of thiotrophic mats in the hypoxic zone of the Black Sea (150-170m water depth, Crimea margin)
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43Species-specific associations between bacterioplankton and photosynthetic picoeukaryotes
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42Metagenomic investigation of six depths from the anchialine Bundera sinkhole
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42A long-standing complex tropical dipole shapes marine microbial biogeography
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42Bacterial communities from the water column and the surface sediments along a transect in the East Sea (Sea of Japan)
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41water Raw sequence reads
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41Mediterranean mud volcano flow Targeted loci
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41Effect of genetics and environment on gut bacteria in Anopheles and Aedes mosquitoes.
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40Bacterial diversity in snow from mid-latitude mountain areas: Alps, Eastern Anatolia, Karakoram and Himalaya.
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39Marine Metagenome
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38Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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38Arctic Ocean
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37marine sediment metagenome Raw sequence reads
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36Natural History Museum (London) Collection Specimens
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36Patagonian fjord prokaryote community
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36Sediment Metagenome
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36Municipal Pensacola Beach Sand Metagenome
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35Gulf of Mexico open ocean Targeted Locus (Loci)
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35Standard filtration practices significantly distort planktonic microbial diversity estimates
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34archaeal community in Haima cold seep in SCS
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3116S amplicons Subtropical Frontal Zone New Zealand
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30Microbial communities in marine surface water
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30Bacterial diversity in the South Adriatic Sea during winter of 2016
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28Bacterial 16S rRNA gene sequencing of Antarctic soil
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27Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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26Centre de Ressources Biologiques de l'Institut Pasteur
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24Prospecting of extreme microbial ecosystems associated to minerals (microbialites, microbial mats and endoevaporites) in Puna, Wetlands and Salars of Argentina, Chile and Bolivia
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2216S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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22Bacteria in domestic water-storage containers with or without mosquito larvae
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22Global Malaspina 2010 deep ocean expedition - rRNA pyrotags
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22Diversity and abundance of Bathyarchaeota (MCG) in South China Sea sediments and the implication of its ecological roles
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22dsrB sequencing of sulfate-reducing microbial communities in Skagerrak and Baltic sediment
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21Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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2016S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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20suspended particulate matter Raw sequence reads
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20Transplant and re-transplant microcosms of Baltic Proper and Bothnian Sea bacterioplankton Targeted Locus (Loci)
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18Diversity and composition of sediment microbial assemblages in an Atlantic port environment
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18Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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18Coastal eutrophication controls the bacterial community composition in different reef habitats of the Spermonde Archipelago, Indonesia.
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18Red Sea Zooplankton Raw sequence reads
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18Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools
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17DDCA-metagenome
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17gas hydrate bearing sediment Raw sequence reads
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17CTD water column metabarcoding
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17Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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17Seawater Targeted Locus (Loci)
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16envinronment Metagenome
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16Marine subseafloor sediment Targeted Locus (Loci)
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16Microbial communities associated with ferromanganese nodules and the surrounding sediments
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16Hydrothermal Deposit Targeted Locus (Loci)
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15Japan Collection of Microorganisms, RIKEN BioResource Center
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14Comparison of copper contaminated soils, with similar uncontaminated controls.
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14Microbial associations in temperate marine copepods from the Gulf of Maine
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13Microbial induced mineral precipitations caused by nitrate treatment for souring control during microbial enhanced oil recovery (MEOR)
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1316S rRNA gene (V2-V3 region) based analysis of soil procaryotic community composition, Alb VIPs 2008
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13Archaea
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13Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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13AllDist Targeted Locus (Loci)
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12Sea water microorganisms Raw sequence reads
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12Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea
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12Southern Ocean microorganisms Targeted Locus (Loci)
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11Habitat and host related variation in sponge bacterial communities in Indonesian coral reefs and marine lakes
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11E1 Targeted Locus (Loci)
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10Trichodesmium spiralis associated microbiome Targeted loci
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103Soil16S
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10Japan Collection of Microorganisms(Bacteria)
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9Marine bacteria Targeted Locus (Loci)
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9Microbial eukaryotes
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916S analysis (pyrosequencing), Hainich grassland VIPs 2008
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9Deep mud-volcano biosphere in the Nankai accretionary wedge
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8Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.
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8Microbial diversity of marine sediments from Ross Sea
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7Microbial diversity studies of Arabian Sea sediment
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7peptide incubation in GOM C6 seawater bacteria Metagenome
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7NMNH Extant Specimen Records
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7Invertebrate Zoology Division, Yale Peabody Museum
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7marine sediment metagenome Raw sequence reads
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6Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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6Extracellular DNA marine sediment Targeted Locus (Loci)
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616S rRNA metagenomic investigation of arsenotrophic bacteriome of ground water and soil from arsenic-prone area of Bangladesh
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6Biodiversidad microbiana de los ecosistemas marinos en la Isla Cayo Serrana durante la Expedición Seaflower 2016 - Proyecto Colombia BIO
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6Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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6Prokaryotic community response to microalgal lysates
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6Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon
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4Ocean sediment-basement interface Targeted Locus (Loci)
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4Metagenomic sequence from soil bacteria
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4CCUG Microorganisms databases(Bacteria)
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4Metabolically active microbial communities in marine sediment under high-CO2 and low-pH extremes
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4Zooplankton communities in the coastal water of northeastern Hokkaido
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416S rRNA sequences of bacterioplankton spatial distributions in the Baltic Proper
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3Canadian Museum of Nature Parasite Collection
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3rDNA amplicon sequencing of Western North Atlantic microbial community
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3Anammox bacteria in sediment cores of Daya Bay, China
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3SAR amplicon from community incubated with various nanophytoplankton in microcosm
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3Atlantic salmon microbiota
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3Porcupine Seabight 16S Ribosomal RNA
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3Bacteria Collection in BCRC
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3Arctic first-year drift ice and under-ice water bacterial communities
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2Marine metagenome ICM_LCR
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2Diet analysis of Japanese sardine and Pacific round herring larvae
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2VAG Mine Pit Pond Metagenome
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2De novo whole metagenome sequencing studies
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2A study on microbial functional groups producing a climate related gas in the ocean
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2Soil DNA extracted from Robinson Ridge, East Antarctica Raw sequence reads
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1ocean bacteria Metagenomic assembly
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1Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea
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1marine Archaea metagenome
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1Green Edge microcosms Raw sequence reads
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1Ocean crust Targeted Locus (Loci)
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1California Current Cruise CCE-P1408 Process Cruise #6
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1Marine metagenome ICM_GPS
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1Seawater Metagenome
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1Bacteria Collection in BCRC
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1Sea water sample Targeted Locus (Loci)
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1ALA species sightings and OzAtlas
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1Mesocosm Targeted Locus (Loci)
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1Microbial Diversity in Antarctic marine sediments (Admiralty Bay and Bransfield Strait)
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1Diesel contamination of Antarctic soils and sediments
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1Marine metagenome ICM_JRV
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1Diversity and structure of benthic bacterial community from South-Eastern Pacific Ocean, Targeted Locus (Loci)
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1Marine metagenome ICM_VAG
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1Marine sediment metagenome ICM_GMS
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1CARBOM cruise 2013 flow cytometry sorted phytoplankton
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1Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans
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1Occurrences in SinBIOTA
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1Microbial diversity associated with copepods in the North Atlantic subtropical gyre
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1Seawater bacteria Metagenome