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GBIF.org (22 November 2020) GBIF Occurrence Download https://doi.org/10.15468/dl.taeuhu
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Scientific name Amoebophrya Koeppen, 1894
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Download as TSV
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10kMarine metagenomes Metagenome
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3kAmplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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2kNahant Collection
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879EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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471Marine metagenomes from the bioGEOTRACES project
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413Marine Water Column Samples Targeted loci environmental
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295SOLA Raw sequence reads
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263INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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248Red Sea microbial plankton Raw sequence reads
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207Nutrient addition mesocosm experiment Targeted Locus (Loci)
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203Protist Diversity in the East China Sea
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181Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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163Temporal sampling of marine metagenomes from Station ALOHA and BATS
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159Exploring Fronts With Multiple Robots Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
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145California Current Cruise CCE-P1408 Process Cruise #6
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136Microbial communities in the ocean Raw sequence reads
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129Protists community in the southern East China Sea
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120anchialine metagenome Raw sequence reads
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120Geographically tagged INSDC sequences
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110Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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110Macroalgal Morphology affects composition and settlement of microbial communities
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92Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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90Coral
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88Extracellular DNA marine sediment Targeted Locus (Loci)
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86Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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84Uncultured eukaryotes Targeted Locus (Loci)
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81Water and Sediment samples Targeted loci environmental
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80Arctic microbiome along Svalbard Cross Shelf transects
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79Red Sea Zooplankton Raw sequence reads
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75Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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71Amundsen Gulf Overwintering Eukaryote Community
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71Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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64Microbial Processes and Biodiversity: OCEAN
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6016S rDNA amplicon of Bacteria and Archaea Metagenome
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58Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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54Zooplankton communities in the coastal water of northeastern Hokkaido
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54Polymetallic nodule field Targeted loci environmental
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54CARBOM cruise 2013 flow cytometry sorted phytoplankton
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53uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads
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52Southern Ocean microorganisms Targeted Locus (Loci)
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48Depth dependent (0-5,000 m) and seasonal variability in archaeal community structure in the subarctic and subtropical western North Pacific.
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46Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion
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45uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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43The Indigo Project: a global citizen science Ocean survey
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40Environmental zooplankton Targeted Locus (Loci)
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39Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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38Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site
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37Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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37blocking PCR amplification of metazoan DNA for protistan diversity
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35Microbial eukaryotes
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35North Sea plastic incubation and reference communities, raw sequence reads
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31Marine metagenome ICM_GPS
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30Marine metagenome ICM_JRV
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29Diet analysis of Pacific Bluefin Tuna larvae
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29ARMS Jeddah sample Raw sequence reads
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29Community structure of Archaea in the western North Pacific and the Arctic Ocean
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27SAR amplicon from community incubated with various nanophytoplankton in microcosm
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26Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
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26Diet analysis of Japanese sardine and Pacific round herring larvae
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26Amplicon-Based Illumina Sequencing Reveals High Diversity of Phytoplankton in the Coastal Waters of Qinhuangdao
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25Bermuda Atlantic Time-series Study metagenomes
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25Metagenome analysis of picoeukaryotes from surface seawater
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23Marine sediment metagenome raw sequence reads
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23Surface ocean Targeted Locus (Loci)
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22marine sediment metagenome Metagenome
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22Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins
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21Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea
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21White sea picoplankton Metagenome
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21Coastal Marine Environment Targeted loci environmental
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21Marine metagenome ICM_WBS
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21A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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20Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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20microbial diversity Raw sequence reads
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20Microbial communities in the phycosphere environment
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19marine metagenome Raw sequence reads
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19Sea spray aerosols at Three California Beaches
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19Eukaryotic protists Metagenome
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18Marine eukaryotes Targeted loci environmental
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18marine metagenome Raw sequence reads
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18California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental
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18Microbial diversity associated with copepods in the North Atlantic subtropical gyre
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17Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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17Sea ice and seawater Raw sequence reads
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17A long-standing complex tropical dipole shapes marine microbial biogeography
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17Protists in Havre-aux-Maisons Lagoon, Magdalen Islands, Quebec, Canada
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16sediment metagenome Raw sequence reads
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16Oxygen minimal zone Targeted loci environmental
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15DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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15Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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15Metabarcoding surveys of the Arctic marine environment
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14sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads
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14Diversity and population structure of Marine Group A in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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13Marine protists Metagenome
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13Nitrate-storing microorganisms in sediments of the Bornholm Basin
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11Magdalen Island Spatio Temporal (MIST) Raw sequence reads
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10The Nanoeukaryotic plankton Raw sequence reads
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10Diversity of Microbial Eukaryotes in Sea Waters From Fildes Peninsula,King George Island, Antarctica
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10Microbial Community Diversity Response to a Changing Arctic Ocean
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10Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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10Bacteria community in the southern East China Sea
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9Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing
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9IMPACT OF SAHARAN DUST DEPOSITION ON BACTERIOPLANKTON IN MARINE SURFACE WATER
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9Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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8Seawater metagenome Targeted loci environmental
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8sediment metagenome Metagenome
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8Magadalen Islands Spatio Temporal (MIST) Large Fraction
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8Prokaryotic community response to microalgal lysates
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8Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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8Biological rejuvenation of iron oxides in bioturbated marine sediments
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7Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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7rDNA amplicon sequencing of Western North Atlantic microbial community
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7Microbial community diversity in Arctic marine sediments and Planktonic microbial
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6Microbial eukaryote Metagenome
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6Active picoeukaryotes in the Eastern Mediterranean Sea
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6Marine sediment metagenome ICM_DSE
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6uncultured eukaryote Raw sequence reads
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6Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.
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616S data describing Antarctic benthic sediment
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6Sediment Metagenome Raw sequence reads
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5Marine metagenome ICM_AWP
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5seawater metagenome Metagenome
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5Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean
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5Microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard.
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5Marine phytoplankton Metagenome
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5uncultured prokaryote Targeted loci environmental
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5Metagenomic community analysis of marine zooplankton using two plankton nets
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5Eukaryote diversity assessment of sediments of the Western English Channel
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5Fungal diversity in Sanya mangrove sediments, China
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5Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)
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5Whale fall
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5Equatorial Pacific Ocean Targeted loci environmental
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4Marine metagenome ICM_LCR
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4Gulf of Mexico open ocean Targeted Locus (Loci)
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4Microbial eukaryote community structure during early phytoplankton blooms in the naturally iron-fertilized Kerguelen area (Southern Ocean) Targeted Locus (Loci)
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4envinronment Metagenome
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4Microbial community of Red Sea (16S amplicon) Targeted Locus (Loci)
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4Global Ocean Sampling Expedition
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4Arctic Ocean
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4sediment metagenome Metagenome
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4water Raw sequence reads
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4marine metagenome Targeted Locus (Loci)
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4Eukaryotic diversity in Central Park
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4Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 sequencing-by-synthesis
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4Shotgun Metagenome Sequencing of Lake Soyang
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4Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
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4Microbial communities in estuarine sediments
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4Metagenomes of Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools
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4Environmental eukaryotes Metagenome
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3Geotraces Raw sequence reads
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3Effects of triclosan on bacterial community composition in natural seawater microcosms
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3Queensland Marine Sediment
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3Preservation of ancient eukaryotic DNA in methane hydrate-associated marine sediments.
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316S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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3Uncultured marine eukaryotes Targeted Locus (Loci)
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3Temporal variation in pesticide biodegradation
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3uncultured marine eukaryote Targeted loci environmental
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3Peruvian eddy shotgun metagenomes
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3Life in a toxic environment
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3ARK26/3_Station212 Targeted Locus (Loci)
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3Marine sample from an Antarctic Bay Raw sequence reads
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3Marine metagenome Targeted loci environmental
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3Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing
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318S-V4 amplification of dinoflagellate cyst communities in the South China Sea
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2Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)
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2deep marine subsurface Raw sequence reads
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2Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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2Atlantic salmon microbiota
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2Microbial eukaryotes present in a Norwegian coastal ecosystem and in the gut content of Calanus copepods from Raunefjorden
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2Assessing the microbial diversity in Cape Comorin ocean water
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2Global phylogeography survey of thermophilic spores in marine sediments.
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2Canada Basin Metagenome
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2Soil metagenome from healthy and unhealthy agricultural soil
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2marine metagenome Raw sequence reads
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2Plankton sample collected from Nanaimo Harbour Targeted Locus (Loci)
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2Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads
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2Microbial ecology of archaeal community in sediment from adjacent waters of Rushan Bay
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2Taxonomic composition of microbial communities in coastal Arctic sediments
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2Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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21)sediments; 2) coral floc Metagenome
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2Arabian sea sediment samples with protist reads Metagenome
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2marine sediment metagenome Targeted Locus (Loci)
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2Uncultured eukaryote community Targeted loci environmental
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1Ocean sediment-basement interface Targeted Locus (Loci)
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1sediment metagenome Raw sequence reads
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116S rRNA gene pyrosequencing and clone library revealed highly diverse microbial communities in natural marine biofilms
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1Coral metagenome ICM_CCB
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1Spatial Variation of Coastal Bacterioplankton Community along a Nitrogen and Phosphorus Co-pollution Gradient
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1Ecological Genomics of the Eastern Tropical South Pacific Oxygen Minimum Zone Metagenome
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1ocean bacteria Metagenomic assembly
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1Ascidian and Seawater Metagenome
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1ETNP Targeted Locus (Loci)
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1Green Edge microcosms Raw sequence reads
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1Sediment bacterial diversity
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1Metagenomic investigation of six depths from the anchialine Bundera sinkhole
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1Marine metagenome ICM_DOF
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1Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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1DSW-2
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1Localized impact of aquaculture effluent on Red Sea coral reef water nutrients and microorganisms
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1Meiobenthos nSSU metagenetic meiobenthic data
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116S Amplicon Data from an Antarctic Cold Seep
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1Microbial biogeography of French caves
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1Diatom Community Composition CCS Diel
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1Bacterial Diversity in the East China Sea
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1Nanticoke Harbour, ON, Canada (plankton SSU 454 sequencing)
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1Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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1Fringing reef Metagenome
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1Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene
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1Marine metagenome ICM_BSP
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1Bayside Harbour, NS, Canada (plankton SSU library 454 sequencing)
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1Marine metagenome ICM_ABR
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1marine sediment Raw sequence reads
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1Marine microbial eukaryote community analysis in Korea
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1uncultured prokaryote Raw sequence reads
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1Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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1Protistan plankton diversity along salt gradient
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1Red Sea sediment 2011 Targeted Locus (Loci)
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1There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work
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1Municipal Pensacola Beach Sand Metagenome
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1Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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1marine sediment metagenome Raw sequence reads
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1Pelagic sediment metagenome of Gulf of Khambhat
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1Microbial eukaryotes Metagenome
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1Bacterial community diverisity