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GBIF.org (10 December 2019) GBIF Occurrence Download https://doi.org/10.15468/dl.go9pkr
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Download as TSV
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43kBiome of Australia Soil Environments
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40kGeographically tagged INSDC sequences
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8kMarine metagenomes Metagenome
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3kInternational Barcode of Life project (iBOL)
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3kChristopher Walker collection of Glomeromycotan fungi
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945Proyecto para compatibilizar el inventario de biota edáfica BGBD con el Sistema Nacional de Información sobre Biodiversidad
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745Hongos formadores de micorrizas arbusculares de la transición Andino-Amazónica del departamento del Caquetá - Proyecto Colombia BIO
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665Distribution of Arbuscular Mycorrhizal Fungi in Terceira and S. Miguel (Azores, Portugal)
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613BIOWIDE eDNA Fungi dataset
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462sediment metagenome Raw sequence reads
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410EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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289Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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256Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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237New Zealand Fungal and Plant Disease Collection (PDD)
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195CARBOM cruise 2013 flow cytometry sorted phytoplankton
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152Red Sea microbial plankton Raw sequence reads
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151California Current Cruise CCE-P1408 Process Cruise #6
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140Condon Fossil Collection
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124SOLA Raw sequence reads
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123Occurrences in SinBIOTA
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122Water and Sediment samples Targeted loci environmental
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114URM - Herbário Pe. Camille Torrand
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104MEL AVH data
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99Nahant Collection
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96marine sediment metagenome Metagenome
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96Protist Diversity in the East China Sea
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75Fungi specimen database of Kanagawa Prefectural Museum of Natural History
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74The New York Botanical Garden Herbarium (NY)
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71ARMS Jeddah sample Raw sequence reads
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71Natural History Museum, University of Tartu
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70Sediment Metagenome Raw sequence reads
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69Fungal diversity in Sanya mangrove sediments, China
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62Marine Water Column Samples Targeted loci environmental
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53Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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51Protists community in the southern East China Sea
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50Harvard University Herbaria: All Records
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44Catalogue of type specimens of fungi and lichens deposited in the Herbarium of the University of Granada (Spain)
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41Registros de hongos en áreas protegidas de la Argentina
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40Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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39Fungal Records Database of Britain and Ireland
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38Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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38Danish Mycological Society, fungal records database
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36Soil metagenome from healthy and unhealthy agricultural soil
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36Marine sediment metagenome raw sequence reads
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36Microbial Processes and Biodiversity: OCEAN
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35HUEG - Herbário da Universidade Estadual de Goiás
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34sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads
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33Extracellular DNA marine sediment Targeted Locus (Loci)
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31Archaea 16S 01-13 Genome sequencing and assembly
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30Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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29Marine fungi Raw sequence reads
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28A practical introduction to microbial molecular ecology through the use of iChips
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27Microbial biogeography of French caves
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27Sediment of acid mine drainage Targeted loci environmental
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27The Indigo Project: a global citizen science Ocean survey
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26sediment metagenome Metagenome
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26Tartu Botanical Garden Root and Leaf Endophytes
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23CABI Bioscience Fungus Collection
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22Banc de dades de biodiversitat de Catalunya-FungaCat
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22microbial community diversities of Tuosu Lake
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21White sea picoplankton Metagenome
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19KUBI Paleobotany Collection
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18CSIC-Real Jardín Botánico-Colección de Hongos (MA-Fungi)
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18Mycology herbarium, Oslo (O)
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17Sea ice and seawater Raw sequence reads
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17The cryptogamy collection (PC) at the Herbarium of the Muséum national d'Histoire Naturelle (MNHN - Paris)
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15UFRN-Fungos - Herbário UFRN - Fungos
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15Genebank, National Institute of Agrobiological Sciences
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14The Nanoeukaryotic plankton Raw sequence reads
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14sediment metagenome Metagenome
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12Eukaryotic protists Metagenome
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11Queensland Marine Sediment
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11Artportalen (Swedish Species Observation System)
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11SAR amplicon from community incubated with various nanophytoplankton in microcosm
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11Exploring Fronts With Multiple Robots – Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
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11Biowide Species data
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11Southern Ocean microorganisms Targeted Locus (Loci)
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11Microbial communities in estuarine sediments
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10Fungal Specimens of National Museum of Nature and Science (TNS)
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10INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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10Meise Botanic Garden Herbarium (BR)
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9Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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9Uncultured eukaryotes Targeted Locus (Loci)
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9Nitrate-storing microorganisms in sediments of the Bornholm Basin
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8HO AVH data
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8Banco de Datos de la Biodiversidad de la Comunitat Valenciana
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8University of Michigan Herbarium
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8Environmental eukaryotes Metagenome
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7Microbial communities in the ocean Raw sequence reads
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7uncultured eukaryote Raw sequence reads
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7Seawater metagenome Targeted loci environmental
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7Community structure of Archaea in the western North Pacific and the Arctic Ocean
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7Eukaryote diversity assessment of sediments of the Western English Channel
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7Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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6Active microbial eukaryotes amidst a marine subsurface RNA paleome
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6CEPEC-Fungi - Coleção Micológica do CEPEC
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6Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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5Microbial eukaryotes present in a Norwegian coastal ecosystem and in the gut content of Calanus copepods from Raunefjorden
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5Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion
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5Hongos del estado de Veracruz
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5ARKO
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5Nutrient addition mesocosm experiment Targeted Locus (Loci)
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5Bell Museum fungi
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5uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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5Metagenome analysis of picoeukaryotes from surface seawater
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5Coral
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4Coral metagenome ICM_CCB
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4Sediment Microcosm Metagenome
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4Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site
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4Diet analysis of Pacific Bluefin Tuna larvae
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4Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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4Metagenomic community analysis of marine zooplankton using two plankton nets
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4Indian_sediments
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4Microbial eukaryote 454 Roche sequencing in estuarine ecosystems
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4Botany (UPS)
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3Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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3water sample Raw sequence reads
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3rDNA amplicon sequencing of Western North Atlantic microbial community
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3Macroalgal Morphology affects composition and settlement of microbial communities
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3BRI AVH data
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3NatureServe Network Species Occurrence Data
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3Botanical Museum, Copenhagen, Mycology Herbarium
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3Fungal occurrences from the Basque Country and neighbouring areas: ARAN-Fungi
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3marine sediment Raw sequence reads
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3Microbial communities in the phycosphere environment
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3soil bacteria and fungi Targeted loci environmental
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3Fungi (S)
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2Saltern of Margherita di Savoia Metagenome
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2SIM-Fungal occurrences compiled by the Iberian Mycological Society
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2Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing
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2Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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2deep marine subsurface Raw sequence reads
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2Metagenomic investigation of six depths from the anchialine Bundera sinkhole
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2Comparison of copper contaminated soils, with similar uncontaminated controls.
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2Fungus herbarium, UiB
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2Microbial eukaryotes
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2Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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2University of California Museum of Paleontology
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2Assessing the microbial diversity in Cape Comorin ocean water
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2Diet analysis of Japanese sardine and Pacific round herring larvae
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2Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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2Herbarium of Umeå University (UME)
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2Mycological Collection - University of Washington Herbarium (WTU)
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2Zooplankton communities in the coastal water of northeastern Hokkaido
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2Marine metagenome ICM_JRV
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2Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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2Royal Botanic Garden Edinburgh Herbarium (E)
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2Effects of organic matter manipulation on archaeal, bacterial, and fungal community assembly
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2Protistan plankton diversity along salt gradient
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2Municipal Pensacola Beach Sand Metagenome
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2sediment metagenome Raw sequence reads
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2Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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2Gothenburg Herbarium - General (GBIF:IH:GB:Herbarium)
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1Tucurui_Metagenoma_MGRAST
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1University of Vienna, Institute for Botany - Herbarium WU
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1FLOR - Herbário do Departamento de Botânica da Universidade Federal de Santa Catarina
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1Loihi Seamount Targeted loci environmental
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1seawater metagenome Raw sequence reads
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1Oxygen minimal zone Targeted loci environmental
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1seawater metagenome Metagenome
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1Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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1Antarctic Hypersaline Brine Raw sequence reads
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1Comparative metagenome analysis of normal and arsenic contaminated soils from ballia district, Uttar Pradesh, India
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1Brown University Herbarium
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1Microbial community of Red Sea (16S amplicon) Targeted Locus (Loci)
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1Saltern microbial community diversity
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1National Trust Species Records
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1Estonian University of Life Sciences
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1Effects of different types of wastewater on microbial degradation of 2,2'',4,4''-tetrabromodiphenyl ether (BDE-47) in anaerobic sediment.
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1Fungus Collections at Staatliches Museum für Naturkunde Karlsruhe (Herbarium KR)
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1University of British Columbia Herbarium (UBC) - Lichen Collection
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1Enriched_Iron_Ore_metagenome
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1Nanticoke Harbour, ON, Canada (plankton SSU 454 sequencing)
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1Marine metagenome ICM_WBS
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1UCT: South Africa Seaweeds(1905-2008)
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1marine metagenome Raw sequence reads
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1Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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1BRERC species records recorded over 15 years ago
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1Marine protists Metagenome
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1Herbarium Senckenbergianum (FR) - Fungi
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1Herbarium (AMNH)
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1DOS-1
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1marine metagenome Raw sequence reads
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116S rDNA amplicon of Bacteria and Archaea Metagenome
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1Photographs of higher plants, mosses, fungi, lichens, and algae
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1uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads
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1Type Localities for organisms and fossils first described from Antarctica
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1Microbial community diversity in Arctic marine sediments and Planktonic microbial
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1USS-2
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1Denver Botanic Gardens, Sam Mitchel Herbarium of Fungi
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1Marine sediment Raw sequence reads
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1marine metagenome Targeted Locus (Loci)
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1Biodiversidad de grupos funcionales de microorganismos en el Parque Nacional Natural de Los Nevados, Colombia
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1Bernice P. Bishop Museum
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1Paleobiology Database
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1Marine microbial eukaryote community analysis in Korea
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1Estudio de la microflora de los suelos de la zona de preservación ecológica 'La Uva' (Sinaloa) con vegetación de selva baja caducifolia empleando taxonomía molecular
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1North Sea plastic incubation and reference communities, raw sequence reads
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1ARC-PPRI: National Collection Of Fungi(1817-2009)
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1Polymetallic nodule field Targeted loci environmental
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1The Fungal, Lichen and Plant Collections at the Herbarium Marburgense
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1Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)
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1Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins
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11)sediments; 2) coral floc Metagenome
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1Bacterial community dynamics during polysaccharide degradation at contrasting sites in the Southern and Atlantic Oceans
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1Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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1Environmental zooplankton Targeted Locus (Loci)
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1Whale fall
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1Biological rejuvenation of iron oxides in bioturbated marine sediments
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1Metazoan sequencing
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1BRERC species records within last 15 years
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1PACA-Fungi - Herbarium Anchieta - Fungi Rickiani
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1Equatorial Pacific Ocean Targeted loci environmental
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1University of Graz, Institute of Plant Sciences - Herbarium GZU
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1National Museum of Natural Science