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19kCollections of Phytoplankton at Herbarium Berolinense, Berlin (B)
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18kNMNH Extant Specimen Records
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8kMarine metagenomes Metagenome
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2kGrethe Hasle Diatom Collection
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2kNahant Collection
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2kAmplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
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1kMICROBIS database
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1kPhytoplankton from the White Sea, Barents Sea, Norwegian Sea and Arctic Basin 1993-2003
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1kArctic Ocean Diversity
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987UPCB - Herbário do Departamento de Botânica
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755Artportalen (Swedish Species Observation System)
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632Benthos, zoo- and phytoplancton data collected during the monitoring cruise of RV "Vladimir Parshin" in 1996.
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580anchialine metagenome Raw sequence reads
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523EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods
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505Eukaryotic diversity in Central Park
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436Marine metagenomes from the bioGEOTRACES project
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335Nutrient addition mesocosm experiment Targeted Locus (Loci)
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281SOLA Raw sequence reads
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270Development and validation of a multi-trophic metabarcoding biotic index for benthic organic enrichment biomonitoring using a salmon farm case-study.
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241Sediment Metagenome Raw sequence reads
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227“Phytoplankton and Zooplankton data collected during the Black Sea cruises of UkrSCES R/V "Georgyi Ushakov" in 1992”
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216Marine Water Column Samples Targeted loci environmental
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201Plant niche rather than soil or species shapes the microbiota
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198Zooplankton communities in the coastal water of northeastern Hokkaido
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18416S Amplicon Data from an Antarctic Cold Seep
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173Temporal sampling of marine metagenomes from Station ALOHA and BATS
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168Macroalgal Morphology affects composition and settlement of microbial communities
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164Red Sea microbial plankton Raw sequence reads
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162Marine invertebrate collection NTNU University Museum
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147Protist Diversity in the East China Sea
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145Naturalis Biodiversity Center (NL) - Micropaleontology
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131marine sediment metagenome Metagenome
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130California Current Cruise CCE-P1408 Process Cruise #6
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126Diet analysis of Japanese sardine and Pacific round herring larvae
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123Extracellular DNA marine sediment Targeted Locus (Loci)
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121Temporal variation in pesticide biodegradation
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121Protists community in the southern East China Sea
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117Effect of size fractionation and DNA extraction on the diversity and composition of prokaryotic and eukaryotic plankton community
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115Exploring Fronts With Multiple Robots Schmidt Ocean Institute Cruise to the Pacific Ocean in 2018
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114CARBOM cruise 2013 flow cytometry sorted phytoplankton
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112Red Sea Zooplankton Raw sequence reads
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110uncultured prokaryote Targeted loci environmental
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106Water and Sediment samples Targeted loci environmental
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96Uncultured eukaryotes Targeted Locus (Loci)
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92Hydrate Ridge, OR - Deep sea cold seep ecosystem Targeted Locus (Loci)
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92INVESTIGATING THE MICROBIAL EUKARYOTIC COMMUNITIES IN THE SURFACE WATERS OF THE ARAFURA SEA AND CORAL SEA
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91Bacterial 16s Amplicon Sequencing of the Atlantic Ocean
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89Paleobiology Database
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83River Macrophytes Database
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81ADDOMEx Tier 3 Experiments: Mesocosm Si with Gulf of Mexico coastal waters
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79North Sea plastic incubation and reference communities, raw sequence reads
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76sediment metagenome Raw sequence reads
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75Arctic microbiome along Svalbard Cross Shelf transects
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74Polymetallic nodule field Targeted loci environmental
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74Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
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72Amundsen Gulf Overwintering Eukaryote Community
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72Microbial communities in the ocean Raw sequence reads
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67Environmental zooplankton Targeted Locus (Loci)
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66ARMS Jeddah sample Raw sequence reads
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64Pelagic Microbiome: viruses to protists. 16S and 18S data from oceanic samples collected at the chlorophyll maximum.
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63Biological rejuvenation of iron oxides in bioturbated marine sediments
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62Eukaryotic natural population from Northern Baffin Bay - Raw sequence reads
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59Eucaryotic microbial communities structure in the headwater watchment of Dongjiang River in the south of China
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59Coral
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5816S rDNA amplicon of Bacteria and Archaea Metagenome
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58Nitrate-storing microorganisms in sediments of the Bornholm Basin
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57Southern Ocean microorganisms Targeted Locus (Loci)
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56SAR amplicon from community incubated with various nanophytoplankton in microcosm
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56“Phytoplankton and Zooplankton data collected during the Black Sea cruises of UkrSCES R/V "Ernst Krenkel" in 1992”
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54ECOPOT_2: Phytoplankton in Flemish waterbodies
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53Successional trajectories of coastal bacterioplankton communities in response to co-exposure of cadmium and phenanthrene
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53Bernice P. Bishop Museum
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52Metagenomic community analysis of marine zooplankton using two plankton nets
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52Sea spray aerosols at Three California Beaches
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50Microbial communities associated with Eurasian watermilfoil, water and sediment
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50Metagenome analysis of picoeukaryotes from surface seawater
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48Diet analysis of Pacific Bluefin Tuna larvae
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47Microbial Processes and Biodiversity: OCEAN
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46Microbial eukaryotes
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44Marine sediment metagenome raw sequence reads
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43Little Sippewissett Marsh Targeted Locus (Loci)
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40Amplicon sequencing of Tara Oceans RNA samples corresponding to size fractions for protists.
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37Herbicide-incubated GBR lagoon microbiomes Targeted loci environmental
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37KiEco Freshwater Ecology: River Macrophytes
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36Microbial communities in the phycosphere environment
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35Community structure of Archaea in the western North Pacific and the Arctic Ocean
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34Temporal dynamics of eukaryotic microbial diversity at a coastal Pacific site
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34marine metagenome Raw sequence reads
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34Surface ocean Targeted Locus (Loci)
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34A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
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33White sea picoplankton Metagenome
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33Comparative study in validity of three regions of 18S-rRNA for eukaryote amplicon sequence analyses
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33Whale fall
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32Sea ice and seawater Raw sequence reads
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32Marine metagenome ICM_JRV
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31Lund Botanical Museum (LD)
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30Soil marker gene sequences across the Nutrient Network
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29sediment metagenome Raw sequence reads
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29Marine metagenome ICM_GPS
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28uncultured marine eukaryote Targeted loci environmental
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28uncultured marine picoeukaryote strain:Peuk_V4_NWP1 Raw sequence reads
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28Bermuda Atlantic Time-series Study metagenomes
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26uncultured marine picoeukaryote strain:Peuk_V4_NWP2 Raw sequence reads
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26Bacteria community in the southern East China Sea
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25Submarine Ligurian Canyons Water Prokaryotic and Protist Communities
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24Metabarcoding surveys of the Arctic marine environment
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23Marine eukaryotes Targeted loci environmental
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23Sediment of acid mine drainage Targeted loci environmental
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23Magdalen Island Spatio Temporal (MIST) Raw sequence reads
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2216S data describing Antarctic benthic sediment
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20Fungal diversity in Sanya mangrove sediments, China
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19Queensland Marine Sediment
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19Short-term interaction of pyrene and cadmium in prokaryotic community in coastal sediment microcosms
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19blocking PCR amplification of metazoan DNA for protistan diversity
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18Heterogeneity of methane seep microbiomes in the NE Pacific
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18Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
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17Sediment Microcosm Metagenome
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17marine metagenome Raw sequence reads
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17Microbial diversity in the Benguela coastal upwelling system as derived from 16S rRNA sequencing and RNA Stable Isotope Probing (SIP)
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17Oxygen minimal zone Targeted loci environmental
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17Diversity of Microbial Eukaryotes in Sea Waters From Fildes Peninsula,King George Island, Antarctica
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17Impacts of crude oil and chemical dispersant exposure on marine microbial biofilm formation and steel corrosion
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17Marine metagenome ICM_WBS
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17Soil metagenome from healthy and unhealthy agricultural soil
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17Protists in Havre-aux-Maisons Lagoon, Magdalen Islands, Quebec, Canada
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17Equatorial Pacific Ocean Targeted loci environmental
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16Abundance, diversity and distribution of Legionellales in wet environments in Sweden
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15Microbial community structure and dynamics in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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15The Indigo Project: a global citizen science Ocean survey
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15Structuring effect of environmental variables on protistan diversity patterns in two anoxic marine basins
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14Seawater metagenome Targeted loci environmental
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14Municipal Pensacola Beach Sand Metagenome
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13Gulf of Mexico open ocean Targeted Locus (Loci)
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1316S and 18S sequences from the epiphytic biofilm on leaves of Enhalus acroides
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13Metagenome data from DNA stable isotope probing of Stiffkey saltmarsh sediment microcosms to investigate methanogenesis from choline
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13Magadalen Islands Spatio Temporal (MIST) Large Fraction
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12Green Edge microcosms Raw sequence reads
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12Metagenomic investigation of six depths from the anchialine Bundera sinkhole
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12Marine sediment metagenome ICM_DSE
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12Marine protists Metagenome
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11Diversity of microbial community (bacteria, micro-eukaryotes and fungi) in the Passage of Lascaux Cave.
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11Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
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11Eukaryotic protists Metagenome
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10Diversity of SE Pacific benthic Bacteria and Archaea communities Targeted Locus (Loci)
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10Microbial eukaryote Metagenome
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10Mariana and Kermadec Trench sediment 16S rRNA gene sequencing
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10Coastal Marine Environment Targeted loci environmental
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10Shotgun Metagenomic Sequencing of the Arctic Ocean during Winter-Spring Transition
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10Protists tag sequencing of 18S rRNA HV 9
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9Saltern of Margherita di Savoia Metagenome
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9ADDOMEx
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9Global Ocean Sampling Expedition
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9Soil microbial diversity in the Maintenance of Exotic vs. Native Diversity experiment (depth study)
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9Geographically tagged INSDC sequences
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9Microbial indicators of anthropogenic marine pollution identified by 16S and 18S metagenomic library analysis
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9Shotgun metagenomic analysis of Lake Paajarvi sediment microbes.
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8seawater metagenome Metagenome
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8uncultured eukaryote Raw sequence reads
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8Amplicon-Based Illumina Sequencing Reveals High Diversity of Phytoplankton in the Coastal Waters of Qinhuangdao
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8Microbial diversity in shallow water hydrothermal sediments of Gueishan Island, Taiwan
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8Marine fungi Raw sequence reads
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7The Nanoeukaryotic plankton Raw sequence reads
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7Phaeobacter inhibens host-attached and free-living communities
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7sea water Picoeukaryotic Community Raw sequence reads Raw sequence reads
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7VAG Mine Pit Pond Metagenome
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7Natural History Museum (London) Collection Specimens
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7Metagenetic analysis of the 18S nuclear small subunit ribosomal RNA gene of a mixed zooplankton assemblage was carried out using the 454 pyrosequencing platform.
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7Gulf Oil Spill underwater oil plume samples Targeted Locus (Loci)
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7Shotgun Metagenome Sequencing of Lake Soyang
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7Botany (UPS)
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6Marine sediment microbial communities in the presence of macrophytes
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6Microbial Community Diversity Response to a Changing Arctic Ocean
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6Northern Gulf of Mexico Hypoxia can Alter Sediment Communities of Nitrifying Archaea
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6Microbial community diversity in Arctic marine sediments and Planktonic microbial
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6Indian_sediments
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6Microbial community structure of chronically polluted marine sediments from a cold region of the southern hemisphere
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6ARK26/3_Station212 Targeted Locus (Loci)
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6Microbial communities in estuarine sediments
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6Marine sample from an Antarctic Bay Raw sequence reads
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6Environmental eukaryotes Metagenome
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6Metazoan sequencing
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5Tucurui_Metagenoma_MGRAST
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5Temperature shifts simulating secondary oil recovery
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5Spirulina necromass degradartion in arctic marine sediments
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5Pelagic sediment metagenome of Gulf of Kutch
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5Protistan plankton diversity along salt gradient
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5Antarctic Snow Algae 2014/15 16S and 18S Illumina Seq of snow algae communities around Ryder Bay, Antarctica
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5Pelagic sediment metagenome of Gulf of Khambhat
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4Marine metagenome ICM_LCR
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4Characteristics of eukaryotic plankton community in the Coastal Waters of Rongcheng by Illumina sequencing
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4Geotraces Raw sequence reads
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4Preservation of ancient eukaryotic DNA in methane hydrate-associated marine sediments.
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4envinronment Metagenome
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4Microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard.
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4Microbial communities associated with Juncus roemerianus and Spartina alterniflora vegetated sediments in Louisiana saltmarshes
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4Microbial eukaryotes present in a Norwegian coastal ecosystem and in the gut content of Calanus copepods from Raunefjorden
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4sediment metagenome Metagenome
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4sediment metagenome Metagenome
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4uncultured prokaryote Targeted loci environmental
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4Microbial ecology of archaeal community in sediment from adjacent waters of Rushan Bay
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4microbial diversity Raw sequence reads
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4Peruvian eddy shotgun metagenomes
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4marine metagenome Targeted Locus (Loci)
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4Microbial eukaryote 454 Roche sequencing in estuarine ecosystems
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4Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 sequencing-by-synthesis
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4Metagenomics of Brava and Tebenquiche lakes microbial mats
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4microbial community diversities of Tuosu Lake
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4Arctic benthos Targeted Locus (Loci)
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3Active microbial eukaryotes amidst a marine subsurface RNA paleome
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3Comparison of marine sediments from the Beguela upwelling zone
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3Meiobenthos nSSU metagenetic meiobenthic data
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3Saltern microbial community diversity
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3Microbial biogeography of French caves
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3Global phylogeography survey of thermophilic spores in marine sediments.
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3marine metagenome Raw sequence reads
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3Plankton sample collected from Nanaimo Harbour Targeted Locus (Loci)
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3Diversity and population structure of Marine Group A in the oxygen minimum zone of the Northeast subarctic Pacific Ocean
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3Marine Sediment from the Berkeley Bay Targeted Locus (Loci)
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3Assessing the effects of salmon farming seabed enrichment using bacterial community diversity and high throughput sequencing
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3De novo whole metagenome sequencing studies
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3Evaluation of filtration and DNA extraction methods for environmental DNA biodiversity assessments across multiple trophic levels.
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3A long-standing complex tropical dipole shapes marine microbial biogeography
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3Sundarbans estuarine ecosystem Metagenome
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3Suffolk Biodiversity Information Service (SBIS) Dataset
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3Nuunat- ORMS formation during oil biodegradation at low temperature
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3Metagenomic investigation of the coastal region of south Gujarat using soil sample - Nargol, Umargam and Dandi
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3Microbial eukaryotes Metagenome
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2Ocean sediment-basement interface Targeted Locus (Loci)
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2Marine metagenome ICM_AWP
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2water sample Raw sequence reads
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2Composición del fitoplancton de la Isla Cayo Serranilla durante la Expedición Seaflower 2017 - Proyecto Colombia BIO
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2ocean bacteria Metagenomic assembly
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2ETNP Targeted Locus (Loci)
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2Microbial eukaryote community structure during early phytoplankton blooms in the naturally iron-fertilized Kerguelen area (Southern Ocean) Targeted Locus (Loci)
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2rDNA amplicon sequencing of Western North Atlantic microbial community
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2Cascading influence of inorganic nitrogen sources on DOM production composition lability and microbial community structure in the open ocean
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2Marine metagenome ICM_DOF
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2NEW-1
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2Microbiome profiling Schlöppnerbrunnen peat cores from different depths
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2DSW-2
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2Marine subseafloor sediment Targeted Locus (Loci)
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2Swan lake bacteria Raw sequence reads
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2Analysis of plasmidome of high-altitude lakes from the Andean Puna
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2SCHEMA_Sediment
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2Arctic sea-ice and sub-ice seawater raw sequence reads
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2Marine phytoplankton Metagenome
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2Assessing the microbial diversity in Cape Comorin ocean water
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2Diatom Community Composition CCS Diel
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2Uncultured marine eukaryotes Targeted Locus (Loci)
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2marine metagenome Metagenome
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2Arctic Ocean
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2Canada Basin Metagenome
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2Fringing reef Metagenome
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2NEW-2
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2California Current System Long Term Ecological Research P1604 (CCS_LTER_P1604) Targeted loci environmental
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2Eukaryote diversity assessment of sediments of the Western English Channel
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2USS-2
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2University of California Santa Barbara Algae Collection
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2Natural Resources Wales Regional Data : Mid-Wales
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2Archaea 16S 01-13 Genome sequencing and assembly
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2Marine sediment Raw sequence reads
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2marine sediment Raw sequence reads
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2Marine microbial eukaryote community analysis in Korea
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2Life in a toxic environment
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2Marine sediment metagenome ICM_FIS
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2Protistan communities of the upper Arctic Ocean (18S SSU-rRNA Targeted Locus)
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2Depth dependent (0-5,000 m) and seasonal variability in archaeal community structure in the subarctic and subtropical western North Pacific.
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2There are 3 zooplankton samples from 3 different ponds, we collected sample and use the fresh samples to do DNA extraction directly, then mix them with adjustment guided by the number of species within each of them. At last, use Hiseq-2599 PE-150 to do NGS work
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2Arabian sea sediment samples with protist reads Metagenome
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216s data marine community of L4 station
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218S-V4 amplification of dinoflagellate cyst communities in the South China Sea
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2marine sediment metagenome Targeted Locus (Loci)
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2Uncultured eukaryote community Targeted loci environmental
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1Thermophilic endospores in temperate sediments
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1DOW-2
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1Coral metagenome ICM_CCB
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1DEEPEND: Microbiome and bacterioplankton rRNA gene sequence data collected from Gulf of Mexico seawater samples. Cruises DP03 and DP04 from Jan 2016 - December 2016
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1Metagenome microbial communities of bottom sediments of the Kara Sea
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1marine plankton metagenome Raw sequence reads
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1Socompa Lake Stromatolite Shotgun Metagenomic Sequencing
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1Ascidian and Seawater Metagenome
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1deep marine subsurface Raw sequence reads
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1Ocean crust Targeted Locus (Loci)
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1Svalbard Targeted Locus (Loci)
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1Effects of triclosan on bacterial community composition in natural seawater microcosms
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1Duke University Herbarium Algae Collection
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1Microbial community in marine sediments
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1Antarctic Hypersaline Brine Raw sequence reads
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1Comparative metagenome analysis of normal and arsenic contaminated soils from ballia district, Uttar Pradesh, India
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1Microbial diversity of Oslo Fjord Pockmark sediments
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1Active picoeukaryotes in the Eastern Mediterranean Sea
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1Diversity, Ecology and Biogeochemistry of cyst-forming acantharia (Radiolaria) in the oceans
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1Foraminifera 18S rDNA and rRNA diversity for fish farms biomonitoring
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1Microbial diversity in the Tongyeong-Geoje coastal area of Korea2
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1Lake sediment sequencing
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1Marine methane seep Targeted Locus (Loci)
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1marine sediment metagenome Raw sequence reads
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1Marine sediment metagenome ICM_CFU
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1This workpackage details only the prokaryote (Archaea and Bacteria) analyses for the MicroPolar project.
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1rRNA, rDNA bacteria thaw ponds Targeted loci environmental
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1Nanticoke Harbour, ON, Canada (plankton SSU 454 sequencing)
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1Raw sequence reads from soil relic DNA study
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1Uncultered bacterium Targeted Locus (Loci)
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1Microbial populations of Lascaux's Apse in relation to collembola and black stains on cave walls.
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1Survey and monitoring records for Scottish Wildlife Trust reserves from reserve convenors and Trust volunteers - Unassessed data
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1DOS-1
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1Temporal dynamics of the particle-attached and free-living microbial communities from coastal seawater
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1Marine sediment metagenome ICM_CRS
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1Environmental Foraminifera Raw sequence reads
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1Microbial diversity and skin mucosal microbiota in farmed Atlantic salmon with ulcerative disorders, raw sequence reads
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1Metagenomics of Ojo de Campo
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1Characteristics of bacterial communities in the deep sediment Lake Baikal from the regions with oil and gases discharging
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1Bacterial communities in sandy sediment at submarine volcanic vents off Panarea Island (Italy)
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1Marine sediment metagenome
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1Bacteria Metagenome
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1How much do we know about marine metazoan biodiversity? Recent disclosures using second generation sequencing.
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1Norwegian Species Observation Service
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1Taxonomic composition of microbial communities in coastal Arctic sediments
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1Marine metagenome ICM_ABR
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1Prince Edward Island marine metgenome Raw sequence reads
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1Sediment microbial community Random survey
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1Benthic Ocean Acidification
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1Enhanced pyrene and benzo[a]pyrene degradation by plant root and SMFC
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1Prokaryotic community response to microalgal lysates
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11)sediments; 2) coral floc Metagenome
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1soil bacteria and fungi Targeted loci environmental
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1Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the Noumea Lagoon
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1Microeukaryotes in metagenomic survey of ancient Siberian permafrost
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1Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing
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1marine sediment metagenome Raw sequence reads
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1Narragansett Bay, RI Sediments Targeted Locus (Loci)
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1Marine bacterial, archaeal and eukaryotic diversity and community structure on the continental shelf of the Western Antarctic Peninsula
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116S rRNA Analysis of Osaka Bay Microbiomes